Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq57 102 8e-17
seq13 91.5 1e-13
>seq57
Length=32437
Score = 102 bits (112), Expect = 8e-17
Identities = 158/220 (72%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATC--TGCGACGGTGCGCG 64286
|||||||| ||||| | ||| || || || ||||||||||| | ||| | ||
Sbjct 25903 CTAAGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACTCAGAC--TACGTC 25960
Query 64287 CGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTT 64346
| || |||||||||||||| ||| |||| |||||||||||||| |||||||| || || |
Sbjct 25961 CATCCTCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCT 26020
Query 64347 TTTCTTGTATTTTTTGCTTTACA--ACCTCCACTGTATCACCGGCGTCCACTTCTACAGT 64404
| || | ||||| | |||||| || | ||| | | ||| || || || | ||
Sbjct 26021 TGTCCTTAATTTTATTTTTTACATTACTTATCGTGTCTGA-AGGC-TCGACCTCAAGCGT 26078
Query 64405 TACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
| |||||| || || | || || ||||| |||||||||
Sbjct 26079 AATGGTCTTACCCGTGAGTGTCTTAACGAATATTTGCATT 26118
>seq13
Length=120561
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| |||||||||||||| ||| | ||||| || ||||| ||||| || || || || ||
Sbjct 71811 TCCTCAAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTG 71870
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
|| ||||| || ||||||| ||| | || || | ||||| || | ||||
Sbjct 71871 TCCTGTATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATT 71930
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| || | ||||||||||| || |||||
Sbjct 71931 GTCTTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642432932760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |