Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=120561 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | ||| ||| || || ||||| || |||| || ||| || ||| || Sbjct 71756 CACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCATCCTC 71815 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || || | || | ||| ||||||||||| ||||| |||||||||||| Sbjct 71816 AAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCCTG 71875 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || ||| ||| | | |||| |||||| | ||| || || | || | || || Sbjct 71876 TATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATTGTCTT 71935 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 ||| || || |||||||| || |||||||| ||| Sbjct 71936 GCCTGTGAGTGTTTTTACGAATATCTGCATCGCT 71969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498547314960