Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq16 116 5e-21
seq1 116 5e-21
seq10 89.7 6e-13
seq5 82.4 9e-11
>seq16
Length=116485
Score = 116 bits (128), Expect = 5e-21
Identities = 673/1060 (63%), Gaps = 28/1060 (3%)
Strand=Plus/Plus
Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT- 115622
|| ||||| || ||||| || ||| | || | | || | |||||| | || |||
Sbjct 64150 TAATACATGCCGGTCTTAAGTCCCCGTTTAAAACCGTAAAAATGCATGCTCGTCAGCTTA 64209
Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682
||| | |||||| | |||| || | || | || || || || || | | || |
Sbjct 64210 GGATA-TGTTGGCTGTGCCATAAAAATATTTAGGCTCTGCGACTGGTCAACATACGGTGC 64268
Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAG 115742
|| || || |||| |||||||| | |||||| | |||||| | || | || ||
Sbjct 64269 CCTGTCAGCTGCCAGATCAATCAAACTACGCATCTTCAGCTCCCACGCTGTCTTATAAAG 64328
Query 115743 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCAT 115802
|||| || || || || ||| || | || |||| ||| || || ||| | ||
Sbjct 64329 CCTCTTTATCTCGTCCGGTATACCCTCAATTCTTTGAATACTTCCCTCTTCCTGTATCAG 64388
Query 115803 GAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTT 115862
|| | |||||| || | ||| ||| | |||| | || || | || |||| | |
Sbjct 64389 GATGTTCTTCATCTCATCGCTCCATAGATTGAGCTTCATCAGGTCGTGCATCAGGTACGT 64448
Query 115863 ATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGG 115922
||||| || ||||||||||| || ||||| | | ||| || || || ||| | ||
Sbjct 64449 GTTGACCACCTGGAACTCACCCGCAAGCGTGCGGCGCGTATAAATATTCGTGGTGAAGGG 64508
Query 115923 CTCAAAGCACTCATTGTTACCCAAG-ATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCA 115981
|||||||||||| ||| ||||| || || || | ||| || |||||||| |||| |
Sbjct 64509 CTCAAAGCACTCGTTG-TACCCGAGTATCTGAGAGGTGCTTGCAGTGGGCATTAGTGCAA 64567
Query 115982 TGAGAAGGCTGTTGCGGAGACC-CACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCG 116040
|| | | || | | ||| || | || || | | ||| | ||| ||
Sbjct 64568 CAAGCAAGGAATTCCTCACACCATACTTCGCT-ATCCTGGCACGGAGACCCCGCCAATCA 64626
Query 116041 TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGC 116100
| ||| | | | || | | |||||||||||| || || | || || | ||
Sbjct 64627 TGGTTTGTCACAGGCACCACGTTCCACATATCAAAATGCAGCACGCCCTGACTCATCGGG 64686
Query 116101 GATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGG 116160
||| ||| | | ||||| || || | ||| ||| | || ||||||| || ||
Sbjct 64687 CTTCCTTCATAGCTGTCATACGGCCCATACTCCTTCGCAAGCTCACAGCTCGCATCAAGT 64746
Query 116161 GCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 116220
||||| || || || ||||| ||||| ||| | || ||||| | ||||||
Sbjct 64747 GCTGCAAAATGAATCGTTTCAAATATGCGCAAATTTACGGCACGCGCCTCCTTTGAATCA 64806
Query 116221 AACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 116280
||| | | || | ||| ||||| || || || || || || ||||| || ||
Sbjct 64807 TACGGCATCCTCAGCATCACAAAAACATCAGCAAGGCCCTGCACTCCAAGGCCGATGGGA 64866
Query 116281 CGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATA 116337
|||||| | | |||| || | ||||| | ||||| ||||| || ||
Sbjct 64867 CGATGTTTGAGATTACTGTTCC---TTGTCTCGGGTAGAGGATACAAATTTACGTCTATC 64923
Query 116338 ACCCTATTTAGATTTTTGGTGACAACCTTTGTG---ATTTCATGAAGCTTTTCGTAATCA 116394
|| | || || || || ||||| ||| ||| |||| || ||||| || || ||
Sbjct 64924 ACTTTGTTGAGGTTCTTTACGACAATCTTGGTGACCATTT--TG-AGCTTCTCATAGTC- 64979
Query 116395 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454
|||||| |||| | || ||| || | || | | ||| || |||| ||||||||
Sbjct 64980 AAACTGGCCGTCT-TGCA-TGA---ACCTGGGCAAGCCGAGGGATGCCAAGTTACACACC 65034
Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514
| | || | || || |||||||| || ||||||| || | || | || ||
Sbjct 65035 GCTATTTCGTTCTCCTCGGTGTACTCCATTATTTCCGAGCATAGGTTGCTGCATTTGATC 65094
Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574
||||| | || ||| ||||| | | | || | ||| |||||| ||| || |||
Sbjct 65095 GTGCCAAGGTGCTTCTGATTGTTCATCCTATTCGCTGAATCTTTGTAGCACATGTACGGC 65154
Query 116575 GTCCCCGTCTCCGTTTGGGACT--TGAGAATAGCCTTCCA 116612
|| || ||||| | | |||| | ||||||||||||||
Sbjct 65155 GTGCCAGTCTCGATCT--GACTGCTCAGAATAGCCTTCCA 65192
>seq1
Length=243087
Score = 116 bits (128), Expect = 5e-21
Identities = 673/1060 (63%), Gaps = 28/1060 (3%)
Strand=Plus/Plus
Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT- 115622
|| ||||| || ||||| || ||| | || | | || | |||||| | || |||
Sbjct 193620 TAATACATGCCGGTCTTAAGTCCCCGTTTAAAACCGTAAAAATGCATGCTCGTCAGCTTA 193679
Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682
||| | |||||| | |||| || | || | || || || || || | | || |
Sbjct 193680 GGATA-TGTTGGCTGTGCCATAAAAATATTTAGGCTCTGCGACTGGTCAACATACGGTGC 193738
Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAG 115742
|| || || |||| |||||||| | |||||| | |||||| | || | || ||
Sbjct 193739 CCTGTCAGCTGCCAGATCAATCAAACTACGCATCTTCAGCTCCCACGCTGTCTTATAAAG 193798
Query 115743 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCAT 115802
|||| || || || || ||| || | || |||| ||| || || ||| | ||
Sbjct 193799 CCTCTTTATCTCGTCCGGTATACCCTCAATTCTTTGAATACTTCCCTCTTCCTGTATCAG 193858
Query 115803 GAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTT 115862
|| | |||||| || | ||| ||| | |||| | || || | || |||| | |
Sbjct 193859 GATGTTCTTCATCTCATCGCTCCATAGATTGAGCTTCATCAGGTCGTGCATCAGGTACGT 193918
Query 115863 ATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGG 115922
||||| || ||||||||||| || ||||| | | ||| || || || ||| | ||
Sbjct 193919 GTTGACCACCTGGAACTCACCCGCAAGCGTGCGGCGCGTATAAATATTCGTGGTGAAGGG 193978
Query 115923 CTCAAAGCACTCATTGTTACCCAAG-ATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCA 115981
|||||||||||| ||| ||||| || || || | ||| || |||||||| |||| |
Sbjct 193979 CTCAAAGCACTCGTTG-TACCCGAGTATCTGAGAGGTGCTTGCAGTGGGCATTAGTGCAA 194037
Query 115982 TGAGAAGGCTGTTGCGGAGACC-CACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCG 116040
|| | | || | | ||| || | || || | | ||| | ||| ||
Sbjct 194038 CAAGCAAGGAATTCCTCACACCATACTTCGCT-ATCCTGGCACGGAGACCCCGCCAATCA 194096
Query 116041 TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGC 116100
| ||| | | | || | | |||||||||||| || || | || || | ||
Sbjct 194097 TGGTTTGTCACAGGCACCACGTTCCACATATCAAAATGCAGCACGCCCTGACTCATCGGG 194156
Query 116101 GATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGG 116160
||| ||| | | ||||| || || | ||| ||| | || ||||||| || ||
Sbjct 194157 CTTCCTTCATAGCTGTCATACGGCCCATACTCCTTCGCAAGCTCACAGCTCGCATCAAGT 194216
Query 116161 GCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 116220
||||| || || || ||||| ||||| ||| | || ||||| | ||||||
Sbjct 194217 GCTGCAAAATGAATCGTTTCAAATATGCGCAAATTTACGGCACGCGCCTCCTTTGAATCA 194276
Query 116221 AACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 116280
||| | | || | ||| ||||| || || || || || || ||||| || ||
Sbjct 194277 TACGGCATCCTCAGCATCACAAAAACATCAGCAAGGCCCTGCACTCCAAGGCCGATGGGA 194336
Query 116281 CGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATA 116337
|||||| | | |||| || | ||||| | ||||| ||||| || ||
Sbjct 194337 CGATGTTTGAGATTACTGTTCC---TTGTCTCGGGTAGAGGATACAAATTTACGTCTATC 194393
Query 116338 ACCCTATTTAGATTTTTGGTGACAACCTTTGTG---ATTTCATGAAGCTTTTCGTAATCA 116394
|| | || || || || ||||| ||| ||| |||| || ||||| || || ||
Sbjct 194394 ACTTTGTTGAGGTTCTTTACGACAATCTTGGTGACCATTT--TG-AGCTTCTCATAGTC- 194449
Query 116395 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454
|||||| |||| | || ||| || | || | | ||| || |||| ||||||||
Sbjct 194450 AAACTGGCCGTCT-TGCA-TGA---ACCTGGGCAAGCCGAGGGATGCCAAGTTACACACC 194504
Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514
| | || | || || |||||||| || ||||||| || | || | || ||
Sbjct 194505 GCTATTTCGTTCTCCTCGGTGTACTCCATTATTTCCGAGCATAGGTTGCTGCATTTGATC 194564
Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574
||||| | || ||| ||||| | | | || | ||| |||||| ||| || |||
Sbjct 194565 GTGCCAAGGTGCTTCTGATTGTTCATCCTATTCGCTGAATCTTTGTAGCACATGTACGGC 194624
Query 116575 GTCCCCGTCTCCGTTTGGGACT--TGAGAATAGCCTTCCA 116612
|| || ||||| | | |||| | ||||||||||||||
Sbjct 194625 GTGCCAGTCTCGATCT--GACTGCTCAGAATAGCCTTCCA 194662
>seq10
Length=142875
Score = 89.7 bits (98), Expect = 6e-13
Identities = 190/283 (67%), Gaps = 8/283 (3%)
Strand=Plus/Minus
Query 175895 AGTTTTGTGAAGATGTACCTCGTTTGAGACGCATCTTTGCCACCCATGAGACGCGTCCCA 175954
|| ||||| || ||||| | | || ||||||||||||||| || ||||| ||
Sbjct 35076 AGATTTGTAAAAATGTAACGTGCGGAAGCCGCATCTTTGCCACCTTGCAGGCGCGTGCCG 35017
Query 175955 AATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAAC 176014
|||||||| ||| ||||| || |||| |||||| || | | | |||| || | |
Sbjct 35016 AATTGACCGGCTGGTTCAAGCAGGTTGACATTGTTGCTCCCAACAAAATCATGTGCAAGC 34957
Query 176015 TTGACAATCGTATCCGCGAGGGAGACT----TCACCGTGATGGTAGGCCGACTTGTCCGC 176070
|||| |||||| | | | | ||| || ||||| || || ||||| | || ||
Sbjct 34956 TTGATAATCGTCT----GCTGCAAACTCATCTCGCCGTGGTGATATGCCGAGTGCTCGGC 34901
Query 176071 CACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGC 176130
||||| || | | ||| || ||||| ||||| || || ||| | | |||||
Sbjct 34900 AACATAACCCACGAGCTGGGCAACCTTAATCTCGGATTTAAGATTCCTCTTAAAGCAACA 34841
Query 176131 ATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATG 176173
||||| || |||| |||| |||||| | || || |||||
Sbjct 34840 GTACATCACTTTTCGCTGTCCAGGCTTAAAACCATCCACCATG 34798
>seq5
Length=183138
Score = 82.4 bits (90), Expect = 9e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 127517 ACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGA 127576
|||||||| | | || || ||||||||||| || || | || || ||||| |||
Sbjct 59915 ACAGCAAATTGATAATGCAGGCCCTCGTCACGTGATATCAACTCGTTAGAGAATGTAAGA 59856
Query 127577 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAG 127636
|| ||||| ||||| || || |||| |||||| || | || || ||| |||||
Sbjct 59855 CCGGGCATAAGACCGCGTTTTTTCAGCCAGAAGATAGATGCGAACGATCCACTAAAGAAC 59796
Query 127637 ATCCCCTCCACACACGCGAACGCAA 127661
| |||||| |||||||| |||||||
Sbjct 59795 AGCCCCTCAACACACGCAAACGCAA 59771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613504293509640
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