Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq57 89.7 1e-12 >seq57 Length=32437 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || || || ||||| || | || |||||| || | |||||| ||| || | | | | Sbjct 25900 AGCCTAAGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACTCAGACTACGT 25959 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || |||||||| || || || || || ||||||||||| ||| ||| || || Sbjct 25960 CCATCCTCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCC 26019 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATT--CGACGGTGTCTGTTGTTTCTACATCCAACG 199589 |||| ||| || | || || ||| | ||||||| | || || || | || Sbjct 26020 TTGTCCTTAATTTTATTTTTTAC--ATTACTTATCGTGTCTGAAGGCTCGACCTCAAGCG 26077 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || |||||||||||||| || || || || ||||| Sbjct 26078 TAATGGTCTTACCCGTGAGTGTCTTAACGAATATTTG 26114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915875230393