Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq57 105 8e-18 seq13 104 3e-17 >seq57 Length=32437 Score = 105 bits (116), Expect = 8e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| |||||||| ||||||||||| || || ||||| || ||| | || | || || Sbjct 25908 CACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACTCAGACTACGTCCATCCTC 25967 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| || || || | ||||||||||| | || | || |||||||||| | Sbjct 25968 AAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTT 26027 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 || || || || | | | |||||| | || || || | ||| ||||| || Sbjct 26028 AATTTTATTTTTTACATTACTTATCGTGTCTGAAGGCTCGACCTCAAGCGTAATGGTCTT 26087 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||||| || || ||||| || ||||||||| Sbjct 26088 ACCCGTGAGTGTCTTAACGAATATTTGCATT 26118 >seq13 Length=120561 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || |||||||| || ||||| |||||| || || || | || || Sbjct 71756 CACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCATCCTC 71815 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| || ||||| | || ||||| |||| || | | |||||||||| Sbjct 71816 AAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCCTG 71875 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | || | | |||||| ||| ||||| || | || || || || Sbjct 71876 TATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATTGTCTT 71935 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || ||||| || || || ||||| Sbjct 71936 GCCTGTGAGTGTTTTTACGAATATCTGCAT 71965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565235722183080