Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 1e-21
seq13 111 2e-19
seq57 109 5e-19
>seq5
Length=183138
Score = 118 bits (130), Expect = 1e-21
Identities = 190/273 (70%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| || ||||| || ||| |||||||| ||| |||||||| || || |||||
Sbjct 59643 GTACGTATCGATCAGCAACGAGTACATTTCACTGTGCACGTTCTCGATCATAATCTGAAA 59584
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
|||||||||||| |||||||| | |||||| || | | ||| ||| | |||||
Sbjct 59583 GCCGTAAAAGCAGCGCGCCTCTTTGAGCTGCACCTCGCGCGAGAAGTTCTCCAAGAGATT 59524
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
||||| ||||| ||||| || || || || || ||||||| | || ||||||||
Sbjct 59523 CTCGTTCACGATACCGTCCGATGCAGCAAAGAATGCGAGCACGTACGATATAAAATGGCG 59464
Query 133347 CTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGAC 133406
||| | ||||||| || | ||| || | ||||| || || || || || || ||
Sbjct 59463 CTCATCTCCGTTCAACCGGTTCCAATCATCAATATCCTTTGATAGATCAACTTCTTCCAC 59404
Query 133407 GGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
||||| || || | || | |||||||||
Sbjct 59403 TGTCCAGAATGATGATAATGCCTGTTTGTACAT 59371
>seq13
Length=120561
Score = 111 bits (122), Expect = 2e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| |||||||||||||| ||||| ||||| || || || | || || ||| | ||
Sbjct 71965 ATGCAGATATTCGTAAAAACACTCACAGGCAAGACAATAACACTTGAGGTGGAGTCGTCC 71906
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || || | ||||| ||||| || || |||| ||
Sbjct 71905 GACACCATCGAGAATGTAAAGGCGAAGATACAGGACAAGGAGGGGATACCACCCGATCAG 71846
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | |||||||| ||||| || || | || || || | |||||| ||
Sbjct 71845 CAACGACTCATATTTGCGGGCAAGCAGCTTGAGGATGGACGGACGCTGAGCGACTATAAT 71786
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455
|| || ||||| ||| |||||||| ||||||||
Sbjct 71785 ATACAGAAGGAGAGC-ACGCTGCACTTGGTGCT 71754
>seq57
Length=32437
Score = 109 bits (120), Expect = 5e-19
Identities = 166/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||||||||| || || |||||||| || ||||| || | || |||||| | |
Sbjct 26118 AATGCAAATATTCGTTAAGACACTCACGGGTAAGACCATTACGCTTGAGGTCGAGCCTTC 26059
Query 38303 CGACAGCGTGCA--AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||| || | || | | ||| | ||||| ||||| ||||| ||||| | |||
Sbjct 26058 AGACA-CGATAAGTAATG-TAAAAAATAAAATTAAGGACAAGGAGGGCATTCCTCCTGAC 26001
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| |||||||| |||| |||||||| ||||| || || | || | || | || |||
Sbjct 26000 CAGCAGCGGCTTATTTTTGCGGGCAAGCAGCTTGAGGATGGACGTAGTCTGAGTGATTAC 25941
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCG 38473
||||| || ||||| ||| ||||| | ||||| | |||| || || ||
Sbjct 25940 AACATACAGAAGGAGAGTACGTTGCATCTTGTGCTTAGGCTGAGGGGAGGACG 25888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500170430431360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |