Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq57 95.1 5e-14
>seq57
Length=32437
Score = 95.1 bits (104), Expect = 5e-14
Identities = 140/195 (72%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 391048 TAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCAT 391107
||||| | || |||||||| ||||| || ||||| || ||||| ||||| || || | |
Sbjct 26119 TAATGCAAATATTCGTTAAGACACTCACGGGTAAGACCATTACGCTTGAGGTCGAGCCTT 26060
Query 391108 CTGATAACATTGAAGCTAT-TAAACAA-AAAATTCAAGATAAGGAAGGAATTCCTCCTGA 391165
| || | || ||| || |||| || |||||| | || ||||| || |||||||||||
Sbjct 26059 CAGACACGAT--AAGTAATGTAAAAAATAAAATTAAGGACAAGGAGGGCATTCCTCCTGA 26002
Query 391166 TCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTA 391225
|| || || | ||||| | || || || ||||| |||||| | | | || |||||
Sbjct 26001 CCAGCAGCGGCTTATTTTTGCGGGCAAGCAGCTTGAGGATGGACGTAGTCTGAGTGATTA 25942
Query 391226 TAATATTGATAAGGA 391240
|| || | |||||
Sbjct 25941 CAACATACAGAAGGA 25927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975708806034932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |