Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 2e-14 >seq10 Length=142875 Score = 95.1 bits (104), Expect = 2e-14 Identities = 263/401 (66%), Gaps = 2/401 (0%) Strand=Plus/Minus Query 184026 AGAAATAATGAATCATGTTAAGAATAAGTCCCTTGATATGACTTCCATCGTTATCTGCAT 184085 |||||| || | | ||| | || || ||||||||||| || || | ||| || Sbjct 34271 AGAAATGATCGAAAAAGTTGATTATCAGGCCCTTGATATGCGAGCCGTCATGATCCTGAT 34212 Query 184086 CGGTCATGATCATGAGTCTTCCGTATCTGAG-TTCGGAGAGTGATGTATACACTTTCCCT 184144 ||||||| || |||| ||||| || || || | || || ||| | || Sbjct 34211 CGGTCATTATTATGACGTGGCCGTACCTCAGACTCTCCG-TCGACGTGTACTCCTTGTGA 34153 Query 184145 TGCTGAAGCCCCAAAATCTTTTTAAGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTT 184204 ||||| ||| ||| || ||||| |||| || | ||| | ||| || | | ||||| Sbjct 34152 TGCTGCAGCGCCAGTATTTTTTTCAGATTGTTCAGCTCTTCGTTCTCCATGATCTGTTTG 34093 Query 184205 ACACTCGCGTCACGCACGTTCTTACATTTACCCCTAAGCGGAAAAACACCGTAATGATCA 184264 | | || || ||||||||| | ||||| | || ||||| || ||||| || || Sbjct 34092 TGATTGGCCTCGCGCACGTTCAACAACTTACCACGCAGAGGAAACACGCCGTAGTGGTCC 34033 Query 184265 CGACCAACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATA 184324 | || || || || || ||| || ||||| ||||| ||||| || || || || | | Sbjct 34032 CTTCCCACCACCGACAGGCCACTTATGGCAAGCGTTTTGGCAGAGTCCCCCTCTGTGAGA 33973 Query 184325 ATAAGAGTACACTTACCAGAGTGTGTGGTACCGGCTTTATTGGCATCGTCGAGTTTTGGA 184384 ||||| | ||||| |||| | |||| || || |||||||||| || ||| Sbjct 33972 ATAAGCGAGCACTTGTGCGAGTTTTTGGTGCCAGCAAGATTGGCATCGCTCAGCTTTTCC 33913 Query 184385 ATACCCGTTATTTTTGATTTACGAGACCCATCTGttttttt 184425 | || |||||||| | |||||| |||||||| || Sbjct 33912 ACGCCAGTTATTTTGCTACTCTTAGACCCGTCTGTTTTCTT 33872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129791058360