Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq10 86.0 7e-12
>seq10
Length=142875
Score = 86.0 bits (94), Expect = 7e-12
Identities = 273/423 (65%), Gaps = 8/423 (2%)
Strand=Plus/Minus
Query 167359 CCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAAAG 167418
|||||||||||||| |||| |||||| || | ||||| || | | || | ||||||
Sbjct 35223 CCCGTACCAATACCATCAGCACCGTTCACAAGCACCATTGGCACGATAGGAACGTAAAAT 35164
Query 167419 TCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGGGA 167478
| ||||| || | ||| || | || || |||| |||||||| |
Sbjct 35163 GCAGGTTCTATTTTCAGGTTATCCTCTATGATATAATTCAGAAGAGCATCATCGCTCTCT 35104
Query 167479 TCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGACGCA 167538
|||| | |||||| | || | || || ||||| ||||| | | || ||||
Sbjct 35103 ACGAATATCTTTCGGGTAATATTCGCCAGATTTGTAAAAATGTAACGTGCGGAAGCCGCA 35044
Query 167539 TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTTA 167598
|| |||||||| ||||| || || |||||||| ||| || || || |||| ||
Sbjct 35043 TCTTTGCCACCTTGCAGGCGCGTGCCGAATTGACCGGCTGGTTCAAGCAGGTTGACATTG 34984
Query 167599 TTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACT----TC 167654
|| ||| | |||| | || | ||||| ||||| | | | ||||| ||
Sbjct 34983 TTGCTCCCAACAAAATCATGTGCAAGCTTGATAATCGTCT----GCTGCAAACTCATCTC 34928
Query 167655 GCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTC 167714
||||||||| || || | || || ||||| | | | ||| |||||||| |||||
Sbjct 34927 GCCGTGGTGATATGCCGAGTGCTCGGCAACATAACCCACGAGCTGGGCAACCTTAATCTC 34868
Query 167715 ATCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACC 167774
||| |||||| | | || || | ||||| || || || || ||| || | |||
Sbjct 34867 GGATTTAAGATTCCTCTTAAAGCAACAGTACATCACTTTTCGCTGTCCAGGCTTAAAACC 34808
Query 167775 ATC 167777
|||
Sbjct 34807 ATC 34805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588973209726200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |