Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq10 87.8 2e-12
>seq10
Length=142875
Score = 87.8 bits (96), Expect = 2e-12
Identities = 278/429 (65%), Gaps = 8/429 (2%)
Strand=Plus/Minus
Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350
|||||||| ||||| || | || ||||| || |||||||| | | | || | ||||||
Sbjct 35223 CCCGTACCAATACCATCAGCACCGTTCACAAGCACCATTGGCACGATAGGAACGTAAAAT 35164
Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAGGA 168410
| ||||| ||| | ||| || | || || || | | ||||| |
Sbjct 35163 GCAGGTTCTATTTTCAGGTTATCCTCTATGATATAATTCAGAAGAGCATCATCGCTCTCT 35104
Query 168411 TCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGTCTGAGAAGCA 168470
| || ||||| || | || | || ||||| |||||||| | | || |||
Sbjct 35103 ACGAATATCTTTCGGGTAATATTCGCCAGATTTGTAAAAATGTAACGTGCGGAAGCCGCA 35044
Query 168471 TCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTTG 168530
|| || ||||| || ||||| || |||||||| |||||||| ||||| | |||
Sbjct 35043 TCTTTGCCACCTTGCAGGCGCGTGCCGAATTGACCGGCTGGTTCAAGCAGGTTGACATTG 34984
Query 168531 TTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATACT----TC 168586
|| || | || | ||| | ||| | |||||| | ||| | | ||| ||
Sbjct 34983 TTGCTCCCAACAAAATCATGTGCAAGCTTGATAATCGTCT--GCT--GCAAACTCATCTC 34928
Query 168587 ACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTC 168646
|| ||||| || || || | || || ||||| || | || || || ||||| || ||
Sbjct 34927 GCCGTGGTGATATGCCGAGTGCTCGGCAACATAACCCACGAGCTGGGCAACCTTAATCTC 34868
Query 168647 ATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACC 168706
|| |||||| | | |||||| ||||||||||| | |||| |||||| | |||
Sbjct 34867 GGATTTAAGATTCCTCTTAAAGCAACAGTACATCACTTTTCGCTGTCCAGGCTTAAAACC 34808
Query 168707 ATCCGCCAT 168715
|||| ||||
Sbjct 34807 ATCCACCAT 34799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978004965960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |