Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq13 111 3e-19
seq57 109 1e-18
>seq13
Length=120561
Score = 111 bits (122), Expect = 3e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||| ||| || || ||||| || ||| || || | ||||| || |||||
Sbjct 71762 GTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCATCCTCAAGCTG 71821
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || || || |||||||| || || || || || || || ||||| || || ||
Sbjct 71822 CTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCCTGTATCTT 71881
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || ||||| |||||||| || ||||| ||||| || | ||||| |||||
Sbjct 71882 CGCCTTTACATTCTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATTGTCTTGCCTGT 71941
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| ||||||||||| | |||||
Sbjct 71942 GAGTGTTTTTACGAATATCTGCAT 71965
>seq57
Length=32437
Score = 109 bits (120), Expect = 1e-18
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008
||| || || || |||||||| ||| | | ||||| || |||||||| || || ||
Sbjct 25926 CTCCTTCTGTATGTTGTAATCACTCAGACTACGTCCATCCTCAAGCTGCTTGCCCGCAAA 25985
Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068
||||| || || ||||| ||||||||||| || ||||| | |||||| | || || ||
Sbjct 25986 AATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTTAATTTTATTTTTTACATT 26045
Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128
|| ||||| ||| || || ||||| |||| ||||| || || | || || ||
Sbjct 26046 ACTTATCGTGTCTGAAGGCTCGACCTCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAAC 26105
Query 195129 GAACACTTGCATTTATGGTTAC-TTGGTGGTTCTTTTTAAATATTTTTTGTTGA 195181
||| | ||||||| | || | | || | ||| || || || |||| || ||||
Sbjct 26106 GAATATTTGCATTAAGGGGTGCGTTTTTTGTT-TTATTTAAGATTTGTTATTGA 26158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109476212426693
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |