Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq57 89.7 4e-12 >seq57 Length=32437 Score = 89.7 bits (98), Expect = 4e-12 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || |||||||| | ||||| || || || ||||||||| ||| | | | ||| Sbjct 25906 AGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACTCAGACTACGTCCATCC 25965 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 ||||| || || || ||||||||||| | ||||| ||||||||||| || || || || Sbjct 25966 TCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 26025 Query 563383 TGAATTTTTTGTTTTAC-TGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGT 563441 | |||||| | |||||| | || || || || | | || || |||| || Sbjct 26026 TTAATTTTATTTTTTACATTACT-TATCGTGTCTGAAGGCTCGACCTCAAGCGTAATGGT 26084 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| || || || |||||||| |||||||| Sbjct 26085 CTTACCCGTGAGTGTCTTAACGAATATTTGCAT 26117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029275956770710