Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq5 100 5e-16
seq16 84.2 4e-11
seq1 84.2 4e-11
>seq5
Length=183138
Score = 100 bits (110), Expect = 5e-16
Identities = 544/853 (64%), Gaps = 19/853 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || | || || ||||||||||| || |||||||| || ||| || |||||
Sbjct 60204 CTGGTACTCAGCAACCCTCTTCTCAAAGAAATTCGTCTTCCCAAACAGCGAAATATTCTC 60145
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
|||||| || || || | | ||| ||||| ||| | ||||| | | || |
Sbjct 60144 CATGAAATCAAACGGATTCGTTACGTTGTACACACGTCCAATGCCCAAATCAACAAGTAT 60085
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
|||||| ||| | || ||||| | |||| | || |||||| || || || ||
Sbjct 60084 TCCATCCGCAACGAATTCAATGTACTGGCACATCAACTTGCAGTTCATACCGATCAGTGA 60025
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
||| ||||||| | | || |||||| | || || | ||| || ||| ||||||||
Sbjct 60024 CACAGGCAAAGAGTCAGAGACAAACTCTTCTTCAATTTCCACTGCCTCCTTCACAATCT- 59966
Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGC---TTG-GCATAGAGCATGCAGG 48134
|| | | || | || ||| || | | || ||| |||| || | || |
Sbjct 59965 CTAATACCTTTTCTTTTGGGCATTG--GCCGATGAGCGTTTTGTTCATA-AGAA--CA-G 59912
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
|||| | |||| ||| ||||| || || | | |||| ||||| ||||| |
Sbjct 59911 CAAATTGATAATGCAGGCCCTCGTCACGTGATATCAACTCGTTAGAGAATGTAAGACCGG 59852
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||| | || | | ||| |||||||| || | ||||| || ||| ||||| | |
Sbjct 59851 GCATAAGACCGCGTTTTTTCAGCCAGAAGATAGATGCGAACGATCCACTAAAGAACAGCC 59792
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314
|||| || ||| ||||| | | | | | ||| || | || || ||||
Sbjct 59791 CCTCAACACACGCAAACGCAATAACACGTGTTGCAAAATCAGAATCTTTATCATTTATCC 59732
Query 48315 A-GGAAAGCGCCCAGTCTGCCTTCTTCTTGA-TGCATGGCATCGTCTCTATGGCCCGG-- 48370
| ||||| ||| || ||||| |||| | | || | || | | || || |
Sbjct 59731 ATTTAAAGC-ACCACTCAGCCTTTCTCTTCACCGTATTG-ATGTTGGCAATCGCATTGAA 59674
Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430
|||| || | | || |||| ||| || || ||| || |||| | ||||||
Sbjct 59673 AAGAAAGTCCTTCTCT-TCCTG-ATCCTTAATGTACGTATCGATCAGCAACGAGTACATT 59616
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
||| |||||| ||||| || ||||| || ||||| ||| | ||||| | |
Sbjct 59615 TCACTGTGCACGTTCTCGATCATAATCTGAAAGCCGTAAAAGCAGCGCGCCTCTTTGAGC 59556
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
||||| || ||||| |||||| |||||||| || || || || || || ||||||
Sbjct 59555 TGCACCTCGCGCGAGAAGTTCTCCAAGAGATTCTCGTTCACGATACCGTCCGATGCAGCA 59496
Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCC 48610
||||| || || || | | ||||||||||| | | | | ||||| |
Sbjct 59495 AAGAATGCGAGCACGTACGATATAAAATGGCGCTCATCTCCGTTCAACCGGTTCCAATCA 59436
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670
| | || || || || ||||||||||| |||||||| || | | ||| | ||||
Sbjct 59435 TCAATATCCTTTGATAGATCAACTTCTTCCACTGTCCAGAATGATGATAATGCCTGTTTG 59376
Query 48671 TACATGCCCCATA 48683
||||| |||||
Sbjct 59375 TACATCTGCCATA 59363
>seq16
Length=116485
Score = 84.2 bits (92), Expect = 4e-11
Identities = 119/167 (71%), Gaps = 3/167 (2%)
Strand=Plus/Plus
Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872
|| ||| |||||||||| || || | ||||||||| ||||| | || | | | | |
Sbjct 65335 ACCCTCCGCATGAACAGATCAGGTATCCACAGCGCTGTGAAAATATCGCGTGCACGCAGC 65394
Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932
|| || || | ||| ||||| | ||| || || |||||||| || | ||||||||||
Sbjct 65395 TCCTCTTTACCCGTGTTCTTGCGTATATCAAGGAACTCAAAGATATCGGAGTGCCACGGC 65454
Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTC 213976
|| | |||||| || | | ||||| | |||||||||| || ||
Sbjct 65455 TCGACGTAGATCGCCATCGATCCCGGTCGTTTCTTGCCGCCTTGATC 65501
>seq1
Length=243087
Score = 84.2 bits (92), Expect = 4e-11
Identities = 119/167 (71%), Gaps = 3/167 (2%)
Strand=Plus/Plus
Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872
|| ||| |||||||||| || || | ||||||||| ||||| | || | | | | |
Sbjct 194805 ACCCTCCGCATGAACAGATCAGGTATCCACAGCGCTGTGAAAATATCGCGTGCACGCAGC 194864
Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932
|| || || | ||| ||||| | ||| || || |||||||| || | ||||||||||
Sbjct 194865 TCCTCTTTACCCGTGTTCTTGCGTATATCAAGGAACTCAAAGATATCGGAGTGCCACGGC 194924
Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTC 213976
|| | |||||| || | | ||||| | |||||||||| || ||
Sbjct 194925 TCGACGTAGATCGCCATCGATCCCGGTCGTTTCTTGCCGCCTTGATC 194971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931528386863360
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