Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 3e-11 >seq10 Length=142875 Score = 84.2 bits (92), Expect = 3e-11 Identities = 189/282 (67%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 14357 ATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAGAAT 14416 |||| ||||||| | |||||| |||| | ||||||||||| |||||| | | |||| Sbjct 34799 ATGGTGGATGGTTTTAAGCCTGGACAGCGAAAAGTGATGTACTGTTGCTTTAAGAGGAAT 34858 Query 14417 CTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTAC 14476 || || || || ||||| || || || | || ||||| || || | || || || Sbjct 34859 CTTAAATCCGAGATTAAGGTTGCCCAGCTCGTGGGTTATGTTGCCGAGCACTCGGCATAT 34918 Query 14477 CACCATGGTGA----AGTATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACAC 14532 ||||| || || ||| | | ||| | |||||| | ||| | ||| | || | Sbjct 34919 CACCACGGCGAGATGAGTTTGC--AGC--AGACGATTATCAAGCTTGCACATGATTTTGT 34974 Query 14533 GGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGG 14592 || ||||| | ||||| |||||||| |||||||| || ||||| || || Sbjct 34975 TGGGAGCAACAATGTCAACCTGCTTGAACCAGCCGGTCAATTCGGCACGCGCCTGCAAGG 35034 Query 14593 TGGTAAGGATGCTTCTCAGACGAGGTACATTTTCACAAAACT 14634 ||| || ||||| || | | |||||||| ||||| || Sbjct 35035 TGGCAAAGATGCGGCTTCCGCACGTTACATTTTTACAAATCT 35076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566773751520