Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq10 84.2 3e-11
>seq10
Length=142875
Score = 84.2 bits (92), Expect = 3e-11
Identities = 189/282 (67%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 14357 ATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAGAAT 14416
|||| ||||||| | |||||| |||| | ||||||||||| |||||| | | ||||
Sbjct 34799 ATGGTGGATGGTTTTAAGCCTGGACAGCGAAAAGTGATGTACTGTTGCTTTAAGAGGAAT 34858
Query 14417 CTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTAC 14476
|| || || || ||||| || || || | || ||||| || || | || || ||
Sbjct 34859 CTTAAATCCGAGATTAAGGTTGCCCAGCTCGTGGGTTATGTTGCCGAGCACTCGGCATAT 34918
Query 14477 CACCATGGTGA----AGTATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACAC 14532
||||| || || ||| | | ||| | |||||| | ||| | ||| | || |
Sbjct 34919 CACCACGGCGAGATGAGTTTGC--AGC--AGACGATTATCAAGCTTGCACATGATTTTGT 34974
Query 14533 GGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGG 14592
|| ||||| | ||||| |||||||| |||||||| || ||||| || ||
Sbjct 34975 TGGGAGCAACAATGTCAACCTGCTTGAACCAGCCGGTCAATTCGGCACGCGCCTGCAAGG 35034
Query 14593 TGGTAAGGATGCTTCTCAGACGAGGTACATTTTCACAAAACT 14634
||| || ||||| || | | |||||||| ||||| ||
Sbjct 35035 TGGCAAAGATGCGGCTTCCGCACGTTACATTTTTACAAATCT 35076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596566773751520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |