Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq13 158 2e-33
seq57 143 4e-29
>seq13
Length=120561
Score = 158 bits (174), Expect = 2e-33
Identities = 182/243 (75%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || ||||| || || || || || || || || ||||| ||||||||
Sbjct 71965 ATGCAGATATTCGTAAAAACACTCACAGGCAAGACAATAACACTTGAGGTGGAGTCGTCC 71906
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || | || || ||||| || || ||||| || || ||||||||||||
Sbjct 71905 GACACCATCGAGAATGTAAAGGCGAAGATACAGGACAAGGAGGGGATACCACCCGATCAG 71846
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|||||||| || ||||| || || |||||||| |||||||| || || || || ||
Sbjct 71845 CAACGACTCATATTTGCGGGCAAGCAGCTTGAGGATGGACGGACGCTGAGCGACTATAAT 71786
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAACCGACGAA 172101
| || |||||| || || ||| | || || ||||| ||||||| |||| || |||
Sbjct 71785 ATACAGAAGGAGAGCACGCTGCACTTGGTGCTCAGGCTGCGGGGTG--GCAA--GAAGAA 71730
Query 172102 GAA 172104
|||
Sbjct 71729 GAA 71727
>seq57
Length=32437
Score = 143 bits (158), Expect = 4e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || || || || || || || || || || || || ||||| ||| | |||
Sbjct 26117 ATGCAAATATTCGTTAAGACACTCACGGGTAAGACCATTACGCTTGAGGTCGAGCCTTCA 26058
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || ||| | ||| || ||| | || ||||| |||||||| || || |||
Sbjct 26057 GACACGATAAGTAATGTAAAAAATAAAATTAAGGACAAGGAGGGCATTCCTCCTGACCAG 25998
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || ||||||||||| || || |||||||| |||||||||| || ||||||||||
Sbjct 25997 CAGCGGCTTATTTTTGCGGGCAAGCAGCTTGAGGATGGACGTAGTCTGAGTGATTACAAC 25938
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || |||||| ||| | || ||||| || ||||| |||| ||
Sbjct 25937 ATACAGAAGGAGAGTACGTTGCATCTTGTGCTTAGGCTGAGGGGAGG 25891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657859283376880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |