Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq57 123 2e-23
seq13 111 1e-19
>seq57
Length=32437
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809
||||||||||| ||| || || || || | || ||||||||||| ||||| || ||
Sbjct 25890 TCCTCCCCTCAGCCTAAGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACT 25949
Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869
|| || || |||| || || ||||| || || || || || || |||||||| | ||
Sbjct 25950 CAGACTACGTCCATCCTCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGG 26009
Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929
| ||||||||||| || ||||| | ||| || ||||| || | ||||||
Sbjct 26010 AATGCCCTCCTTGTCCTTAATTTTATTTTTTACATTACTTATCGTGTCTGAAGGCTCGAC 26069
Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || |||||||| |||||||| ||||| || || || |||||
Sbjct 26070 CTCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAACGAATATTTGCAT 26117
>seq13
Length=120561
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|| || |||| || ||| || |||| ||| | |||||||||||||| || ||||||||
Sbjct 71736 TTGCCACCCCGCAGCCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCG 71795
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| | || |||| || || ||||| || || || || ||||||||||| || |
Sbjct 71796 CTCAGCGTCCGTCCATCCTCAAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGT 71855
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCT 34925
|| | |||||||||||| | ||| || || || || || || | || | ||
Sbjct 71856 GGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTAC--ATTCTCGATGGTGTCGGACGACT 71913
Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || |||| ||||| ||||| || ||||| || ||||| || ||||||||
Sbjct 71914 CCACCTCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691295604601
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |