Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq13 86.0 1e-11
>seq13
Length=120561
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| |||||| |||||||| | ||||| || ||||| || |||| || || ||
Sbjct 71964 TGCAGATATTCGTAAAAACACTCACAGGCAAGACAATAACACTTGAGGTGGAGTCGTCCG 71905
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | |||||||| || ||||| || || || || ||||||||||| |
Sbjct 71904 ACACCATCGAGAATGTAAAGGCGAAGATACAGGACAAGGAGGGGATACCACCCGATCAGC 71845
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| ||||||| ||||| || || || | || ||| | ||| | | || |||||||
Sbjct 71844 AACGACTCATATTTGCGGGCAAGCAGCTTGAGGATGGACGGACGCTGAGCGACTATAATA 71785
Query 146212 TACAAAAAGA 146221
|||| || ||
Sbjct 71784 TACAGAAGGA 71775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786162675536680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |