Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq13 98.7 8e-16
seq57 86.0 5e-12
>seq13
Length=120561
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|||||||| || |||||| || || || || ||||| || | || || |||
Sbjct 71754 AGCACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCATCC 71813
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || ||||| ||| |||| | || ||||||||| || || || ||||| |||||
Sbjct 71814 TCAAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCC 71873
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|||| || || ||| | || | ||||| || || || ||||| ||||| ||
Sbjct 71874 TGTATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATTGTC 71933
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || | ||||| || |||||||||||
Sbjct 71934 TTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
>seq57
Length=32437
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 29558 GTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG 29617
|||||||||||| | ||||| | ||| | ||| || || || ||||| |||||
Sbjct 25889 GTCCTCCCCTCAGCCTAAGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCAC 25948
Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677
| | || ||| || || || ||||| ||| | || | | ||||| || || |
Sbjct 25949 TCAGACTACGTCCATCCTCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAG 26008
Query 29678 GAATACCCTCTTTGTCTTGTAATTTT-TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736
|||| ||||| ||||| | ||||||| | ||| ||| | || ||||| ||| | ||
Sbjct 26009 GAATGCCCTCCTTGTCCT-TAATTTTATTTTTTACATTACTTATCGTGTCTGAAGGCTCG 26067
Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| ||||| || || || || || || | || ||||| ||||| ||||||
Sbjct 26068 ACCTCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAACGAATATTTGCATT 26118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217420648439
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |