Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq57 96.9 3e-15
seq13 89.7 5e-13
>seq57
Length=32437
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 137221 TCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATA 137279
|| || |||||||||||||| |||| | | || | || || || || || || ||| |
Sbjct 25927 TCCTTCTGTATGTTGTAATCACTCAGACTACGTCCA-TCCTCAAGCTGCTTGCCCGCAAA 25985
Query 137280 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 137339
|| || || ||||| || ||||| ||||| || ||||| ||||||| | ||||| |
Sbjct 25986 AATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTTAATTTTATTTTTTACATT 26045
Query 137340 TTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 137399
| |||||||| || || || |||| || | ||||| || || | ||| || ||
Sbjct 26046 ACTTATCGTGTCTGAAGGCTCGACCTCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAAC 26105
Query 137400 GAATATTTGCAT 137411
||||||||||||
Sbjct 26106 GAATATTTGCAT 26117
>seq13
Length=120561
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/205 (71%), Gaps = 3/205 (1%)
Strand=Plus/Plus
Query 137221 TCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATA 137279
|| || ||||| || || ||||||| || | || | || || || || || || ||| |
Sbjct 71775 TCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCA-TCCTCAAGCTGCTTGCCCGCAAA 71833
Query 137280 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 137339
|| || |||||||||||||| ||||| || || ||||| || || |||| |
Sbjct 71834 TATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATT 71893
Query 137340 TTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 137399
|| | ||||| | | || || |||| || | |||||||| || | |||||||||
Sbjct 71894 CTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTAC 71953
Query 137400 GAATATTTGCATAGCT-TATGTTTT 137423
|||||| ||||| ||| | ||||||
Sbjct 71954 GAATATCTGCATCGCTCTTTGTTTT 71978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488541685522800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |