Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq13 118 1e-21
seq57 98.7 1e-15
>seq13
Length=120561
Score = 118 bits (130), Expect = 1e-21
Identities = 146/197 (74%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| ||||||||||| || |||| || ||| | | | ||||| ||||||||||||||
Sbjct 71774 CTCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCA-TCCTCAAGCTGCTTGCCCGCAA 71832
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
| ||||| || ||||| ||||| || || || |||||||| ||||| ||| | |
Sbjct 71833 ATATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACAT 71892
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
||| | ||||||| | |||||| || | || | || ||||| || || |||||||
Sbjct 71893 TCTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTA 71952
Query 133648 CGAAAATCTGCATGGCT 133664
|||| |||||||| |||
Sbjct 71953 CGAATATCTGCATCGCT 71969
>seq57
Length=32437
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| |||||||| |||||||| | || | | | | ||||| ||||||||||||||
Sbjct 25926 CTCCTTCTGTATGTTGTAATCACTCAGACTACGTCCA-TCCTCAAGCTGCTTGCCCGCAA 25984
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
|||| |||||||||||||| ||||| ||||| |||||||| | || || | || | |
Sbjct 25985 AAATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTTAATTTTATTTTTTACAT 26044
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
| |||||| | ||||| || || | || | ||| || || || || || || |
Sbjct 26045 TACTTATCGTGTCTGAAGGCTCGACCTCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAA 26104
Query 133648 CGAAAATCTGCAT 133660
|||| || |||||
Sbjct 26105 CGAATATTTGCAT 26117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483418509793960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |