Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq57 122 8e-23
seq13 111 1e-19
>seq57
Length=32437
Score = 122 bits (134), Expect = 8e-23
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580
||| | ||| | ||| |||||||||||||| || ||||||||||| || | || |
Sbjct 25902 CCTAAGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACTCAGACTACGTCC 25961
Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640
|| || |||||||| |||||||| || | |||||||||||| | ||||| || ||||||
Sbjct 25962 ATCCTCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTT 26021
Query 35641 GTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700
|||| | || || | || | | | | |||||| | || ||||| | ||| ||
Sbjct 26022 GTCCTTAATTTTATTTTTTACATTACTTATCGTGTCTGAAGGCTCGACCTCAAGCGTAAT 26081
Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| |||||||| | || || || ||||| ||||||
Sbjct 26082 GGTCTTACCCGTGAGTGTCTTAACGAATATTTGCATT 26118
>seq13
Length=120561
Score = 111 bits (122), Expect = 1e-19
Identities = 169/241 (70%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 35496 TCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555
|| ||| || || ||||| || | ||| | |||||| || | ||| |||||||| || |
Sbjct 71725 TCTTCTTCTTCTTGCCACCCCGCAGCCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGTA 71784
Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615
| || || ||| || || || | || || |||||||| ||||||||||| | || |
Sbjct 71785 TATTATAGTCGCTCAGCGTCCGTCCATCCTCAAGCTGCTTGCCCGCAAATATGAGTCGTT 71844
Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675
|||| || | || | | |||||||||| ||||| ||| | | | | | ||||
Sbjct 71845 GCTGATCGGGTGGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTCTCGATGGTGT 71904
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
|| ||| |||||||| | || || || || || || | ||||| || ||||||||||
Sbjct 71905 CGGACGACTCCACCTCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTACGAATATCTGCA 71964
Query 35736 T 35736
|
Sbjct 71965 T 71965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450791464365320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |