Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq5 127 2e-24
>seq5
Length=183138
Score = 127 bits (140), Expect = 2e-24
Identities = 364/555 (66%), Gaps = 11/555 (2%)
Strand=Plus/Plus
Query 43731 TATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGA 43790
||||||| ||||||||| | ||| | ||||| ||||||| |||||||||||| |
Sbjct 59363 TATGGCAGATGTACAAACAGGCATTATCATCATTCTGGACAGTGGAAGAAGTTGATCTAT 59422
Query 43791 CTAAAGACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGG 43850
| || || | | |||||| || || | | || ||||||||||| | |
Sbjct 59423 CAAAGGATATTGATGATTGGAACCGGTTGAACGGAGATGAGCGCCATTTTATATCGTACG 59482
Query 43851 TTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAAT---TTGGTTAGTCGGT 43907
| | || || |||||||| ||||| || || || || ||| |||| | |
Sbjct 59483 TGCTCGCATTCTTTGCTGCATCGGACGGTATCGTGAACGAGAATCTCTTGGAGAAC---T 59539
Query 43908 TTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAG 43967
| ||| || || || | ||| || || || ||||| || ||||| ||| || |
Sbjct 59540 TCTCGCGCGAGGTGCAGCTCAAAGAGGCGCGCTGCTTTTACGGCTTTCAGATTATGATCG 59599
Query 43968 AAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACG 44027
| || | || ||||||||| | ||||| ||||||||||| || ||| | | |
Sbjct 59600 AGAACGTGCACAGTGAAATGTACTCGTTGCTGATCGATACGTACATTAAGGATCAGGAAG 59659
Query 44028 AGAAGCATCGATTGTTTAATGCGATAG-AAACAGTACCTGCGATTAAACATAAAGCAGAC 44086
||||| | | || |||||||| | |||| | | || | || || || ||
Sbjct 59660 AGAAGGACTTTCTTTTCAATGCGATTGCCAACA-TCAATACGGTGAAGAGAAAGGCTGAG 59718
Query 44087 TGGGCCCTTAAATGGATAAATTCAAATGATTC---TTTTGGAGAACGACTTGTCGCGTTT 44143
||| | |||||||||||||| || ||||| ||||| | ||| || | ||||||
Sbjct 59719 TGGTGCTTTAAATGGATAAATGATAAAGATTCTGATTTTGCAACACGTGTTATTGCGTTT 59778
Query 44144 GCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAA 44203
|| ||| || || | |||||| |||||||| || | || || ||| | || |||
Sbjct 59779 GCGTGTGTTGAGGGGCTGTTCTTTAGTGGATCGTTCGCATCTATCTTCTGGCTGAAAAAA 59838
Query 44204 CGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTA 44263
|| ||| | ||||| || | || || || || ||||| ||| ||||| || ||| |
Sbjct 59839 CGCGGTCTTATGCCCGGTCTTACATTCTCTAACGAGTTGATATCACGTGACGAGGGCCTG 59898
Query 44264 CATTGCGATTTTGCT 44278
|||| | ||||||
Sbjct 59899 CATTATCAATTTGCT 59913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397454164125895
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |