Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq16 138 1e-27
seq1 138 1e-27
seq10 86.0 8e-12
>seq16
Length=116485
Score = 138 bits (152), Expect = 1e-27
Identities = 609/945 (64%), Gaps = 28/945 (3%)
Strand=Plus/Plus
Query 117958 GTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGT 118017
|| ||| || || |||| |||||||| | |||||| | |||||| | ||| | |
Sbjct 64265 GTGCCCTGTCAGCTGCCAGATCAATCAAACTACGCATCTTCAGCTCCCACGCTGTCTTAT 64324
Query 118018 AGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGA 118077
| || |||| || || || || ||| || | || |||| || ||| | ||| |
Sbjct 64325 AAAGCCTCTTTATCTCGTCCGGTATACCCTCAATTCTTTGAATACTTCCCTCTTCCTGTA 64384
Query 118078 CCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGAT 118137
|| || | |||||| || | ||| ||| | ||| | || || | || || |
Sbjct 64385 TCAGGATGTTCTTCATCTCATCGCTCCATAGATTGAGCTTCATCAGGTCGTGCATCAGGT 64444
Query 118138 GCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGT 118197
| | ||||| || ||||||||||| || ||||| | | ||| ||||| || |||
Sbjct 64445 ACGTGTTGACCACCTGGAACTCACCCGCAAGCGTGCGGCGCGTATAAATATTCGTGGTGA 64504
Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAG-ATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256
| |||||||||||||| |||| |||| || || || | ||| || |||||||| ||
Sbjct 64505 AGGGCTCAAAGCACTCGTTGT-ACCCGAGTATCTGAGAGGTGCTTGCAGTGGGCATTAGT 64563
Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAATGCGTTCCTTGAGAGCGTCCCA 118315
|| | || | | || | | ||| | ||| ||| | | | |||| | |||
Sbjct 64564 GCAACAAGCAAGGAATTCCTCACACCATACTTCGCTA-TCCTGGCACGGAGACCCCGCCA 64622
Query 118316 GTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGC 118375
|| | ||| | | | || | | |||||||||||| || || | || || |
Sbjct 64623 ATCATGGTTTGTCACAGGCACCACGTTCCACATATCAAAATGCAGCACGCCCTGACTCAT 64682
Query 118376 TGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTC 118435
|| ||| ||| | | ||||| || || | ||| ||| | || ||||||| ||
Sbjct 64683 CGGGCTTCCTTCATAGCTGTCATACGGCCCATACTCCTTCGCAAGCTCACAGCTCGCATC 64742
Query 118436 GAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGA 118495
|| ||||| || || |||||||| ||||| ||| | || ||||| | ||
Sbjct 64743 AAGTGCTGCAAAATGAATCGTTTCAAATATGCGCAAATTTACGGCACGCGCCTCCTTTGA 64802
Query 118496 ATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 118554
|||| ||| | || || || | ||| ||||| || || || || || || ||||| |
Sbjct 64803 ATCATACGGCA-TCCTCAGCATCACAAAAACATCAGCAAGGCCCTGCACTCCAAGGCCGA 64861
Query 118555 TTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTAT 118611
| || |||||| | | |||| |||| | |||| | ||||| ||||| |
Sbjct 64862 TGGGACGATGTTTGAGATTACTGTTCCTTG---TCTCGGGTAGAGGATACAAATTTACGT 64918
Query 118612 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA---TTTCATGAAGCTTTTCGT 118668
| || || | || || || || ||||| ||| |||| ||| ||| |||| || |
Sbjct 64919 CTATCACTTTGTTGAGGTTCTTTACGACAATCTTGGTGACCATTT--TGA-GCTTCTCAT 64975
Query 118669 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 118728
| ||||| ||| |||| | ||| || || | || | | ||| || |||| ||||
Sbjct 64976 AGTCAAA-CTGGCCGTCT-TGCAT-GA---ACCTGGGCAAGCCGAGGGATGCCAAGTTAC 65029
Query 118729 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCT 118788
|||| | | || | || || |||||||| || ||||||| ||| | ||| | |
Sbjct 65030 ACACCGCTATTTCGTTCTCCTCGGTGTACTCCATTATTTCCGAGCATAGGTTGCTGCATT 65089
Query 118789 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 118848
| || ||||| | || ||| ||||| | | | || | ||| ||||| |||||
Sbjct 65090 TGATCGTGCCAAGGTGCTTCTGATTGTTCATCCTATTCGCTGAATCTTTGTAGCACATGT 65149
Query 118849 ATGGCGTCCCCGTCTCCGTTTGGGACT--TGAGAATAGCCTTCCA 118891
| ||||| || ||||| | || ||| | ||||||||||||||
Sbjct 65150 ACGGCGTGCCAGTCTCGATCTG--ACTGCTCAGAATAGCCTTCCA 65192
>seq1
Length=243087
Score = 138 bits (152), Expect = 1e-27
Identities = 609/945 (64%), Gaps = 28/945 (3%)
Strand=Plus/Plus
Query 117958 GTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGT 118017
|| ||| || || |||| |||||||| | |||||| | |||||| | ||| | |
Sbjct 193735 GTGCCCTGTCAGCTGCCAGATCAATCAAACTACGCATCTTCAGCTCCCACGCTGTCTTAT 193794
Query 118018 AGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGA 118077
| || |||| || || || || ||| || | || |||| || ||| | ||| |
Sbjct 193795 AAAGCCTCTTTATCTCGTCCGGTATACCCTCAATTCTTTGAATACTTCCCTCTTCCTGTA 193854
Query 118078 CCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGAT 118137
|| || | |||||| || | ||| ||| | ||| | || || | || || |
Sbjct 193855 TCAGGATGTTCTTCATCTCATCGCTCCATAGATTGAGCTTCATCAGGTCGTGCATCAGGT 193914
Query 118138 GCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGT 118197
| | ||||| || ||||||||||| || ||||| | | ||| ||||| || |||
Sbjct 193915 ACGTGTTGACCACCTGGAACTCACCCGCAAGCGTGCGGCGCGTATAAATATTCGTGGTGA 193974
Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAG-ATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256
| |||||||||||||| |||| |||| || || || | ||| || |||||||| ||
Sbjct 193975 AGGGCTCAAAGCACTCGTTGT-ACCCGAGTATCTGAGAGGTGCTTGCAGTGGGCATTAGT 194033
Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAATGCGTTCCTTGAGAGCGTCCCA 118315
|| | || | | || | | ||| | ||| ||| | | | |||| | |||
Sbjct 194034 GCAACAAGCAAGGAATTCCTCACACCATACTTCGCTA-TCCTGGCACGGAGACCCCGCCA 194092
Query 118316 GTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGC 118375
|| | ||| | | | || | | |||||||||||| || || | || || |
Sbjct 194093 ATCATGGTTTGTCACAGGCACCACGTTCCACATATCAAAATGCAGCACGCCCTGACTCAT 194152
Query 118376 TGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTC 118435
|| ||| ||| | | ||||| || || | ||| ||| | || ||||||| ||
Sbjct 194153 CGGGCTTCCTTCATAGCTGTCATACGGCCCATACTCCTTCGCAAGCTCACAGCTCGCATC 194212
Query 118436 GAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGA 118495
|| ||||| || || |||||||| ||||| ||| | || ||||| | ||
Sbjct 194213 AAGTGCTGCAAAATGAATCGTTTCAAATATGCGCAAATTTACGGCACGCGCCTCCTTTGA 194272
Query 118496 ATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 118554
|||| ||| | || || || | ||| ||||| || || || || || || ||||| |
Sbjct 194273 ATCATACGGCA-TCCTCAGCATCACAAAAACATCAGCAAGGCCCTGCACTCCAAGGCCGA 194331
Query 118555 TTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTAT 118611
| || |||||| | | |||| |||| | |||| | ||||| ||||| |
Sbjct 194332 TGGGACGATGTTTGAGATTACTGTTCCTTG---TCTCGGGTAGAGGATACAAATTTACGT 194388
Query 118612 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA---TTTCATGAAGCTTTTCGT 118668
| || || | || || || || ||||| ||| |||| ||| ||| |||| || |
Sbjct 194389 CTATCACTTTGTTGAGGTTCTTTACGACAATCTTGGTGACCATTT--TGA-GCTTCTCAT 194445
Query 118669 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 118728
| ||||| ||| |||| | ||| || || | || | | ||| || |||| ||||
Sbjct 194446 AGTCAAA-CTGGCCGTCT-TGCAT-GA---ACCTGGGCAAGCCGAGGGATGCCAAGTTAC 194499
Query 118729 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCT 118788
|||| | | || | || || |||||||| || ||||||| ||| | ||| | |
Sbjct 194500 ACACCGCTATTTCGTTCTCCTCGGTGTACTCCATTATTTCCGAGCATAGGTTGCTGCATT 194559
Query 118789 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 118848
| || ||||| | || ||| ||||| | | | || | ||| ||||| |||||
Sbjct 194560 TGATCGTGCCAAGGTGCTTCTGATTGTTCATCCTATTCGCTGAATCTTTGTAGCACATGT 194619
Query 118849 ATGGCGTCCCCGTCTCCGTTTGGGACT--TGAGAATAGCCTTCCA 118891
| ||||| || ||||| | || ||| | ||||||||||||||
Sbjct 194620 ACGGCGTGCCAGTCTCGATCTG--ACTGCTCAGAATAGCCTTCCA 194662
>seq10
Length=142875
Score = 86.0 bits (94), Expect = 8e-12
Identities = 189/283 (67%), Gaps = 8/283 (3%)
Strand=Plus/Minus
Query 179032 AGTTTTGTGAAGATGTACCTCGTTTGAGACGCATCTTTGCCACCCATGAGACGCGTCCCA 179091
|| ||||| || ||||| | | || ||||||||||||||| || ||||| ||
Sbjct 35076 AGATTTGTAAAAATGTAACGTGCGGAAGCCGCATCTTTGCCACCTTGCAGGCGCGTGCCG 35017
Query 179092 AATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAAC 179151
|||||||| ||| ||||| || |||| |||||| || | | |||| || | |
Sbjct 35016 AATTGACCGGCTGGTTCAAGCAGGTTGACATTGTTGCTCCCAACAAAATCATGTGCAAGC 34957
Query 179152 TTGACAATCGTATCCGCGAGGGAGACT----TCACCGTGATGGTAAGCCGACTTGTCCGC 179207
|||| |||||| | | | | ||| || ||||| || || ||||| | || ||
Sbjct 34956 TTGATAATCGTCT----GCTGCAAACTCATCTCGCCGTGGTGATATGCCGAGTGCTCGGC 34901
Query 179208 CACATATGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGC 179267
||||| || | | ||| || ||||| ||||| || || ||| | | |||||
Sbjct 34900 AACATAACCCACGAGCTGGGCAACCTTAATCTCGGATTTAAGATTCCTCTTAAAGCAACA 34841
Query 179268 ATACATCACCTTTCTTTGTGAAGGCTTGAGGCCGTCGGCCATG 179310
|||||||| |||| ||| |||||| | || || |||||
Sbjct 34840 GTACATCACTTTTCGCTGTCCAGGCTTAAAACCATCCACCATG 34798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618432270163240
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