Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq13 123 6e-23
seq57 116 9e-21
>seq13
Length=120561
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| || || || || | ||| || ||| ||| || || || ||||| || || |||
Sbjct 71745 CGCAGCCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCTCAGCGTC 71804
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||| || ||||||||||| || || || || ||||| || || || || | ||
Sbjct 71805 CGTCCATCCTCAAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGTATCCCC 71864
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||| ||||| || || || ||||||||||| || || ||||| ||
Sbjct 71865 TCCTTGTCCTGTATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCCACCTCAAGT 71924
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || ||||| || ||||| || | ||||||
Sbjct 71925 GTTATTGTCTTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
>seq57
Length=32437
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
|| || || ||||| || | || ||| || || ||||| ||||| || | | |
Sbjct 25900 AGCCTAAGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACTCAGACTACGT 25959
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||| || ||||||||||| || || ||||| || || ||||||||||||| || |||
Sbjct 25960 CCATCCTCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCC 26019
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||||| || || | ||| || || || ||||| || || ||||| || ||
Sbjct 26020 TTGTCCTTAATTTTATTTTTTACATTACTTATCGTGTCTGAAGGCTCGACCTCAAGCGTA 26079
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| ||||| |||||||| ||||| || || | ||||||
Sbjct 26080 ATGGTCTTACCCGTGAGTGTCTTAACGAATATTTGCATT 26118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159146371230335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |