Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq57 93.3 3e-14 >seq57 Length=32437 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || |||||||| || |||||||| || || || || || || || || | | Sbjct 26118 AATGCAAATATTCGTTAAGACACTCACGGGTAAGACCATTACGCTTGAGGTCGAGCCTTC 26059 Query 23670 GGACACTGTT-GAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | | ||| | |||| | |||||| ||||| || || | || || || | Sbjct 26058 AGACACGATAAGTAATGTAAAAA-ATAAAATTAAGGACAAGGAGGGCATTCCTCCTGACC 26000 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||||| | || ||||| ||||| || || || || | ||| | | | | ||||||| Sbjct 25999 AGCAGCGGCTTATTTTTGCGGGCAAGCAGCTTGAGGATGGACGTAGTCTGAGTGATTACA 25940 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||||||| || ||| || || ||| | || | ||| || | |||||| Sbjct 25939 ACATACAGAAGGAGAGTACGTTGCATCTTGTGCTTAGGCTGAGGGGAGGA 25890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008038712532