Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq57 93.3 3e-14
>seq57
Length=32437
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || |||||||| || |||||||| || || || || || || || || | |
Sbjct 26118 AATGCAAATATTCGTTAAGACACTCACGGGTAAGACCATTACGCTTGAGGTCGAGCCTTC 26059
Query 23670 GGACACTGTT-GAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | | ||| | |||| | |||||| ||||| || || | || || || |
Sbjct 26058 AGACACGATAAGTAATGTAAAAA-ATAAAATTAAGGACAAGGAGGGCATTCCTCCTGACC 26000
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| ||||| | || ||||| ||||| || || || || | ||| | | | | |||||||
Sbjct 25999 AGCAGCGGCTTATTTTTGCGGGCAAGCAGCTTGAGGATGGACGTAGTCTGAGTGATTACA 25940
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||||||| || ||| || || ||| | || | ||| || | ||||||
Sbjct 25939 ACATACAGAAGGAGAGTACGTTGCATCTTGTGCTTAGGCTGAGGGGAGGA 25890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008038712532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |