Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq5 136 4e-27
>seq5
Length=183138
Score = 136 bits (150), Expect = 4e-27
Identities = 371/563 (66%), Gaps = 9/563 (2%)
Strand=Plus/Minus
Query 23507 AACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTA 23566
|||| ||||| | | |||| ||||| || || | ||||| || ||||| ||||| |
Sbjct 59916 AACA-GCAAATTGATAATGCAGGCCCTCGTCACGTGATATCAACTCGTTAGAGAATGTAA 59858
Query 23567 ATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGA 23626
|| ||||| | || |||||||| | ||| || || | || || ||||| |||||
Sbjct 59857 GACCGGGCATAAGACCGCGTTTTTTCAGCCAGAAGATAGATGCGAACGATCCACTAAAGA 59798
Query 23627 AAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAG 23686
| | ||||||||| |||||| || | || |||||| |||| | || | ||||
Sbjct 59797 ACAGCCCCTCAACACACGCAAACGCAATAACACGTGTTGCAAAATCAGAATCTTTATCAT 59738
Query 23687 AAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTT 23746
|||||||| ||| | |||||| || || | || | |||| || |
Sbjct 59737 TTATCCATTTAAAGCACCACTCAGCCTTTCTCTTCACCGTATTGATGTTGGCAATCGCAT 59678
Query 23747 TTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACA 23806
| || ||||| || ||||| | ||| | || || ||||| || || || ||||
Sbjct 59677 TGAAAAGAAAGTCCTTCTCTTCCTGATCCTTAATGTACGTATCGATCAGCAACGAGTACA 59618
Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866
||||| || | || || || ||||||||| || ||||| || | || || |
Sbjct 59617 TTTCACTGTGCACGTTCTCGATCATAATCTGAAAGCCGTAAAAGCAGCGCGCCTCTTTGA 59558
Query 23867 ATTGAACATCATTAAAAAA--TCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924
|| || || | || ||| || | ||| ||||| || ||||| || ||
Sbjct 59557 GCTGCACCTCGCGCGAGAAGTTCTCCAAG--AGATTCTCGTTCACGATACCGTCCGATGC 59500
Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA--TCAGTTGATAATTTTTTC 23982
||||||||| || || || || ||||||||| | ||| || ||| || |||
Sbjct 59499 AGCAAAGAATGCGAGCACGTACGATATAAAATGGCGCTCATCTCCGTT--CAACCGGTTC 59442
Query 23983 CAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCA 24042
||||||| |||||| ||||||| ||||||||| || |||||||| || || || ||
Sbjct 59441 CAATCATCAATATCCTTTGATAGATCAACTTCTTCCACTGTCCAGAATGATGATAATGCC 59382
Query 24043 CGCTTATACATTAGCCAAATATC 24065
| || ||||| |||| | |||
Sbjct 59381 TGTTTGTACATCTGCCATACATC 59359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521485529450600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |