Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq13 118 1e-21
seq57 107 2e-18
>seq13
Length=120561
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || | | ||||| |||||||||||||||||||| || |||||||||
Sbjct 71738 GCCACCCCGCAGCCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCT 71797
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || || ||||||||||| || ||||| || || || || || | ||
Sbjct 71798 CAGCGTCCGTCCATCCTCAAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGG 71857
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| || || ||| | | | |||||| |||||||||
Sbjct 71858 TATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCCAC 71917
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | ||||| || || || || || || |||||||| ||||||||
Sbjct 71918 CTCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
>seq57
Length=32437
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| ||||||| ||| ||||||||||| ||||| || || || | || | || ||
Sbjct 25908 CACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACTCAGACTACGTCCATCCTC 25967
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||||||||| || || || || ||||| ||||| | |||| || |||||||||| |
Sbjct 25968 AAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTT 26027
Query 41773 GATTTT-TTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
||||| || || | || | ||||| | ||| ||||| | ||| || || |
Sbjct 26028 AATTTTATTTTTTACATTAC-TTATCGTGTCTGAAGGCTCGACCTCAAGCGTAATGGTCT 26086
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || ||||| ||||| || |||||
Sbjct 26087 TACCCGTGAGTGTCTTAACGAATATTTGCAT 26117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462301809834800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |