Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq319 129 6e-25 seq2275 122 9e-23 >seq319 Length=278629 Score = 129 bits (142), Expect = 6e-25 Identities = 291/435 (67%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 15913 TTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTC 15972 ||| ||||| || ||||||||||||||||| || || || | | || || || Sbjct 176151 TTGATAATCGGAGACACGTTTTTCGAAGAAGTTTGTCTTGCCTTGAAGGGAGATCAGGTC 176210 Query 15973 CATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAA 16032 |||||| ||||||||||| | || | ||| | || || || | | Sbjct 176211 CATAAAGTCAAAGGGATTGGAAGAGTTGTAGTGCTTGTCTTGACCGAGAGCCACCAAGAG 176270 Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCG 16092 | ||| || || ||||| || ||||||||||||||| | || || || || || Sbjct 176271 ACGATCGGCGACGAATTCGATGTATTGACACATTAAGGTTGAGTTCATGCCAATGAGAGC 176330 Query 16093 TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATC 16152 || || ||||| | || || |||| ||| || ||| | |||||||| |||||| || Sbjct 176331 CACAGGGAGAGCGTCCGTCAAGAATTCTTGCTCGATCGCCACCGCTTCGACAATGATTTC 176390 Query 16153 GGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGT 16211 | || || | | ||| | || || || ||||| || || ||||| | Sbjct 176391 CCGCACCCG-GTCACGGCTAGGTTGGTTGTGGAGATGGCCAAACAGTAAGCAGGCGAAAT 176449 Query 16212 CGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTT 16271 || || || ||||||||||||||||| ||||||||||| || || || || ||||| Sbjct 176450 CGGTGTGGAGGCCTTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAAACCAGGCATCA 176509 Query 16272 TTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAA 16331 || |||||||| | ||| || || | ||||| | ||||| ||||| ||||| || | Sbjct 176510 GGCCACGTTTCTTGAGCCAAAAGATGGAGGCAAAGGCACCCGAGAAGAAGATACCTTCCA 176569 Query 16332 CAGATGCAAAAGCGA 16346 | | ||||| |||| Sbjct 176570 CGGCAGCAAAGGCGA 176584 >seq2275 Length=1761326 Score = 122 bits (134), Expect = 9e-23 Identities = 295/447 (66%), Gaps = 0/447 (0%) Strand=Plus/Plus Query 15913 TTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTC 15972 ||| ||||| || |||||||| || ||||| ||||| || | | ||| || || Sbjct 1159326 TTGATAATCGGAGACACGTTTTTCAAAAAAGTTGGTTTTGCCTTGGAGAGAGATCAGATC 1159385 Query 15973 CATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAA 16032 |||||| || ||||| || || | | | ||| | ||||| | | | Sbjct 1159386 CATAAAGTCGAAGGGGTTGGTGGATTTGTAGTGCTTCTCTTGACCCAGAGCGACCAGAAG 1159445 Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCG 16092 | ||| || || ||||| || ||||| ||||| | | | | || || || ||||| Sbjct 1159446 GCGATCGGCGACGAATTCGATGTATTGGCACATAAGCTTGGAGTTCATACCGATAAGGGC 1159505 Query 16093 TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATC 16152 || |||||||| | || || |||| ||||| || | || ||||| |||||| || Sbjct 1159506 GACAGGAAGAGCGTCGGTCAAGAATTCCTGTTCGATGGCGACGGCTTCGACAATGATTTC 1159565 Query 16153 GGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTC 16212 | |||| | | ||| | || || || || || | | || || ||||| Sbjct 1159566 AAGGACTCGGGCGTGGCTAGGTTGGTAGTGGAGATGGTTGAATAGCAAGCAGGCAAAGTC 1159625 Query 16213 GCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTT 16272 | || || |||||||||| |||||| ||||||||||| || || || || ||||| Sbjct 1159626 GGTGTGAAGGCCTTCGTCTCGGCTGATCAGTTCGTTGGAGAAGGTCAAGCCAGGCATCAA 1159685 Query 16273 TCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAAC 16332 || || ||||| | ||| || || | || |||| || || ||||| ||||| ||||| Sbjct 1159686 ACCACGCTTCTTGAGCCAAAAGATAGAGGCGAATGCACCAGAGAAGAAGATACCTTCAAC 1159745 Query 16333 AGATGCAAAAGCGATTAATCGTTCCGC 16359 || ||||| |||| | |||||| || Sbjct 1159746 AGCAGCAAAGGCGACAAGTCGTTCGGC 1159772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511380275874160