Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3740 111 1e-19 >seq3740 Length=327319 Score = 111 bits (122), Expect = 1e-19 Identities = 175/251 (70%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 101600 TTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGTCTAGGA 101659 ||||||||||||||| | | ||||||| ||| ||||||| || || ||| | || Sbjct 127094 TTAAAGTCATCAATGGAGTCTATTTTTCTAGTGAATGTAAGTGTGGGGAAGGGTTTGGGT 127153 Query 101660 GTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCT 101719 || || | || || || ||||| | || || ||||||| |||| ||| || Sbjct 127154 TCACGAGTGAGTTGTTCCTTGAGCGCATCCAGATGGTCGACATAGACATGAGTATCACCC 127213 Query 101720 ATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAA 101779 ||||| || || || |||||||| | | | ||||| ||||| ||||| | ||| || Sbjct 127214 ATAGTGTGAATGAATTCTCCAGGTTCCAAGTCGGTGACGTGAGCGATCATTCGAGTCAAT 127273 Query 101780 AGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATAC 101839 |||| |||| |||||||| || || || |||| |||||||| || ||||| || Sbjct 127274 AGAGCATAGGAGGCAATGTTGAAAGGGACACCTAGACCCATATCGCAAGACCTTTGGTAG 127333 Query 101840 AGTTGACAGGA 101850 ||| ||| || Sbjct 127334 AGTACACATGA 127344 Score = 87.8 bits (96), Expect = 1e-12 Identities = 198/295 (67%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 |||||||||| | | | || | | || ||||| || | || || ||||| || | Sbjct 127505 ATTCCAAGCAGATAGAATGATGCGGCGGTCAGTAGGATTGTTCTTGATGGTATCGATGA- 127563 Query 101986 CTGTTT-TAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTG 102044 ||| || |||||| || || |||| ||| |||| || || | ||| || | Sbjct 127564 CTGCTTGTAATTGATCCACACCTTGTCCAGTATAGTCTGTATCACAGTCAACATAGTCAG 127623 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 |||| || || | ||| || || ||||| |||||||||||||| |||| || || || Sbjct 127624 CTCCAAAGTGTCGCCATTGGAAGCCATAGACAGGTCCAAGATCCCCTTGTCGTCGGTGAT 127683 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 || ||||| || || || || ||| || ||||| ||||||| || | | ||| Sbjct 127684 TCAAGCCAAGCTTGTCCAAGTATTCTCTTGACCCATTGCCATCCCAGATCTTGATACCAC 127743 Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTC 102219 | | || || | ||||| | |||| | | ||||||||||| |||||||| Sbjct 127744 GTTCGGAGAGATGATTGCTATTAGTATCCGCACGAATAAACCACAAGAGTTCTTC 127798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361227698125838