Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3208 131 1e-25 seq3256 116 3e-21 seq236 116 3e-21 seq2275 87.8 2e-12 >seq3208 Length=262556 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| ||| | ||| || |||||||||||||| ||||| | || || || | || Sbjct 84080 AGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCT 84139 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || |||||||| || ||| | ||||| | ||| ||||| || | ||||||||| || Sbjct 84140 TCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCT 84199 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||||||||| || | | ||| | ||| | ||| ||||| ||||||||| Sbjct 84200 TGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTC 84259 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | ||||| ||||| |||||||| Sbjct 84260 TTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 >seq3256 Length=796958 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | ||| || |||||||| ||||| ||||| | Sbjct 723628 CCACCACGGAGACGGAGAACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAG 723569 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || ||||| |||||||| || | || | | || ||||| ||| Sbjct 723568 AGCGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGG 723509 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||||||| || || | ||| || || || ||| | Sbjct 723508 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTATCGATAGAGTCGGAGGATTCCACT 723449 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||||||| || || || |||||||| |||||||| Sbjct 723448 TCCAAGGTAATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 723402 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| || |||||||| ||||| ||||| | Sbjct 723856 CCACCACGGAGACGGAGAACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAG 723797 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || ||||| ||||| || || | || | | ||||| || ||| Sbjct 723796 AGAGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGGGG 723737 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||||||| ||||| | | ||| || ||| || ||| | Sbjct 723736 ATACCTTCCTTGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCCACT 723677 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || |||||||| || || || |||||||| |||||||| Sbjct 723676 TCCAGAGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 723630 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | ||| || |||||||||||||| ||||| | Sbjct 723400 CCACCACGGAGACGGAGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAA 723341 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || |||| || ||||| || | || |||| |||||||| ||| Sbjct 723340 AGAGTGCGGCCATCTTCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGG 723281 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || |||||||| || || | | ||| | || | || | Sbjct 723280 ATTCCTTCCTTATCTTGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACT 723221 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 || | || ||||||||||| || || || ||||| || |||||||| |||| Sbjct 723220 TCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATGTTGA 723169 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | ||| || || ||||| ||||| ||||| | || || | | || Sbjct 724525 AGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAAAGTACGACCATCT 724466 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || ||| | || | | |||||||| ||| | ||||||||||| Sbjct 724465 TCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGGGATACCTTCCTTGTCT 724406 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||||| || || | ||| || ||| || ||| ||||| ||||| ||| Sbjct 724405 TGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCACTTCCAAAGTAATAGTC 724346 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || |||||||| |||||||| Sbjct 724345 TTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| || |||||||| ||||| ||||| | Sbjct 724084 CCACCACGGAGACGGAGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAG 724025 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || ||||| |||||||| || | || | | || ||||| ||| Sbjct 724024 AGCGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGG 723965 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||||||| ||||| | | ||| || ||| || ||| | Sbjct 723964 ATTCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACT 723905 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || || || || || | || ||||| || |||||||| Sbjct 723904 TCAAGGGTGATTGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| || || ||||| ||||| ||||| | Sbjct 724312 CCACCACGGAGACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAG 724253 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || |||| ||||| || || | || | | || ||||| ||| Sbjct 724252 AGCGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGG 724193 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||||||| ||||| | | ||| || || || ||| | Sbjct 724192 ATACCTTCCTTGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACT 724133 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| || || || || || ||||| |||||||| Sbjct 724132 TCCAGAGTGATTGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 >seq236 Length=318481 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | |||||| |||||||||||||| || || | Sbjct 112565 CCACCACGGAGACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAG 112624 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || ||||| |||||||| ||| | || || | || ||||| || Sbjct 112625 AGGGTGCGGCCATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGA 112684 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||||| || || | | ||| | ||| || ||| | Sbjct 112685 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACT 112744 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || |||||||| || | ||| ||||| || |||||||| Sbjct 112745 TCAAGGGTGATTGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 >seq2275 Length=1761326 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | |||||| |||||||||||||| ||||| | | Sbjct 759205 CCACCACGGAGACGGAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 759264 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || |||| || || || ||||| ||| | ||||| | ||||| || || Sbjct 759265 AAAGTACGGCCGTCTTCGAGTTGCTTGCCAGCAAAGATAAGACGTTGCTGATCAGGAGGG 759324 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAG 21111 | ||||||||||| ||||||||| || || | | ||| || Sbjct 759325 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCGATAG 759367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422231729136008