Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq3256 125 6e-24 seq236 120 2e-22 seq3208 116 3e-21 seq2275 91.5 1e-13 seq1528 87.8 1e-12 seq304 87.8 1e-12 seq197 84.2 2e-11 >seq3256 Length=796958 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| ||| |||| || ||||| ||||| ||||| || |||| ||| | Sbjct 723171 AACATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTTGAATCT 723230 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || | | | | | |||||||||| ||| ||||| ||||| | ||| ||| Sbjct 723231 TCCGACTCCATCGACAACGTCAAGCAAAAGATTCAAGATAAGGAAGGAATCCCCCCAGAC 723290 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || ||| |||| ||||| || ||||| |||||||||||| | ||| | | || ||| Sbjct 723291 CAGCAACGACTCATCTTCGCCGGCAAGCAATTGGAAGATGGCCGCACTCTTTCTGACTAC 723350 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGT 25243 || ||||||||||||||||||||||| |||| Sbjct 723351 AACATTCAAAAGGAATCTACTCTTCATCTGGT 723382 Score = 109 bits (120), Expect = 5e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| ||||||||| ||| |||| || | Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | |||||||||| || || || |||||| | ||| ||| ||| Sbjct 723462 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 723521 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 ||| | | ||||| || ||||||||| |||||||| || | || | | || |||| Sbjct 723522 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCT--CTGACTACA 723579 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGT 25243 | || |||||||||||||||||||| |||| Sbjct 723580 ACATCCAAAAGGAATCTACTCTTCATTTGGT 723610 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| || || || ||| |||| || | Sbjct 723630 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACTCTGGAAGTGGAATCCTCT 723689 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || | |||||||| || || || |||||| | ||| ||||| Sbjct 723690 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGATCAG 723749 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | ||||| || || |||||| |||||||| | ||| | | || ||||| Sbjct 723750 CAACGTTTGATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACTCTCTCTGACTACAAC 723809 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 || ||||||||||||||||||||| |||| Sbjct 723810 ATCCAAAAGGAATCTACTCTTCACTTGGT 723838 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || |||| || ||||| || ||| ||| |||| || | Sbjct 723858 ATGCAAATCTTCGTCAAGACCCTGACTGGTAAAACAATCACCCTTGAAGTGGAATCCTCT 723917 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | | | |||||||| || || || ||||| | ||| ||| ||| Sbjct 723918 GACTCTATCGACAACGTGAAGCAAAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAA 723977 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 ||| | | ||||| || ||||||||| |||||||| || | || | | || |||| Sbjct 723978 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCT--CTGACTACA 724035 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGT 25243 | || ||||||||||||||||||||| |||| Sbjct 724036 ACATCCAAAAGGAATCTACTCTTCACCTGGT 724066 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | || || ||||| || || || || || ||| |||| || | Sbjct 724086 ATGCAAATCTTTGTGAAGACCTTGACTGGTAAGACAATCACTCTGGAAGTGGAATCCTCG 724145 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || | |||||||| || || || |||||| | ||| ||| ||| Sbjct 724146 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 724205 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | ||||| || || ||||||||||||||| | || | | || ||||| Sbjct 724206 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCCGTACGCTCTCTGACTACAAC 724265 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 || ||||| ||||||||||||||| |||| Sbjct 724266 ATCCAAAAAGAATCTACTCTTCACTTGGT 724294 >seq236 Length=318481 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || | || ||||| || || ||| ||| |||| || | Sbjct 112791 ATGCAAATCTTCGTCAAGACGCTTACAGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 112732 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || |||||||||| ||| || || |||||| | || ||| ||| Sbjct 112731 GACTCCATCGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 112672 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||| ||||||||| |||||||| | || | | |||||||| Sbjct 112671 CAACGTCTCATCTTTGCCGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGATTACAAC 112612 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||||||||||||| |||||||| |||| Sbjct 112611 ATTCAAAAGGAATCCACTCTTCATTTGGT 112583 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || |||| ||||| || || ||| ||| |||| || | Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | | |||||||||| ||| ||||||||||| | || |||||| Sbjct 111919 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCAA 111860 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||||||||| || |||||| |||||||| | || | | || ||||| Sbjct 111859 CAACGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAAC 111800 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 || ||||| ||||| || || ||| |||| Sbjct 111799 ATCCAAAAAGAATCCACCCTGCACTTGGT 111771 Score = 82.4 bits (90), Expect = 6e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 25111 TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTG 25170 |||||||||| || ||||||||||| | || ||||||||| | |||||||||| Sbjct 112131 TCAAGCAAAAGATCCAAGATAAAGAAGGCATCCCTCCTGATCAACAACGTCTTATCTTTG 112072 Query 25171 CGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTA 25230 | || |||||| |||||||| | || | | || ||||| || ||||| ||||| | Sbjct 112071 CTGGTAAACAACTGGAAGATGGCCGCACGCTCTCGGACTACAACATCCAAAAAGAATCCA 112012 Query 25231 CTCTTCACATGGT 25243 | || ||| |||| Sbjct 112011 CCCTGCACTTGGT 111999 >seq3208 Length=262556 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| |||| || ||||| ||||| || || || ||| |||| || || Sbjct 84063 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCA 84004 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | | |||||||||| ||| ||||||||||| | || || || Sbjct 84003 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCAG 83944 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||| ||||||||| | |||||| ||| | | |||||||| Sbjct 83943 CAACGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAAC 83884 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||| || || ||| ||||| | || |||||||| || Sbjct 83883 ATCCAAAAGGAATCAACCCTACACTTGGTGCTCCGTTTACGAGGTGG 83837 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | ||||| | || ||||| |||||||| ||| |||| | | Sbjct 84291 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCT 84232 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | | |||| ||||| || ||||| ||||| | || || ||| Sbjct 84231 GACTCCATCGACAACGTCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCAA 84172 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | ||||||||||| || ||||| | |||||| | || | |||| ||||| Sbjct 84171 CAGCGCCTTATCTTTGCCGGGAAACAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 84112 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 |||||||||||||| |||||||| ||||| Sbjct 84111 ATTCAAAAGGAATCGACTCTTCATCTGGTG 84082 >seq2275 Length=1761326 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 25111 TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTG 25170 |||||||||| || || || |||||| | || ||||| ||| | |||||||||| Sbjct 759355 TCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCTCCTGATCAGCAACGTCTTATCTTTG 759296 Query 25171 CGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTA 25230 | ||||| ||| | ||||| | ||| || | || ||||| |||||||||||||| | Sbjct 759295 CTGGCAAGCAACTCGAAGACGGCCGTACTTTGTCTGACTACAACATTCAAAAGGAATCCA 759236 Query 25231 CTCTTCACATGGT 25243 |||||||| |||| Sbjct 759235 CTCTTCACTTGGT 759223 >seq1528 Length=6275 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 || |||||||||| || || || |||||| | || ||||| ||| | ||||||| Sbjct 4381 ATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCTGATCAGCAACGTCTTATCT 4440 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 | || ||||| ||| | |||||| ||| || |||| ||||| || |||||||||| Sbjct 4441 TCGCTGGCAAGCAACTCGAAGATGGTCGCACTTTGTCCGACTACAACATCCAAAAGGAAT 4500 Query 25228 CTACTCTTCACATGGT 25243 | ||||||||| |||| Sbjct 4501 CCACTCTTCACTTGGT 4516 >seq304 Length=62727 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 || |||||||||| ||| || || |||||| | || ||||| ||| | ||||||| Sbjct 38976 ATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAGCAACGTCTTATCT 38917 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 |||| ||||| ||| | |||||| | || || |||| ||||| || |||||||||| Sbjct 38916 TTGCCGGCAAGCAACTCGAAGATGGCCGTACGTTGTCCGACTACAACATCCAAAAGGAAT 38857 Query 25228 CTACTCTTCACATGGT 25243 | ||||| || |||| Sbjct 38856 CCACTCTCCATTTGGT 38841 >seq197 Length=169696 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 || |||||||||| || ||||| |||||| | ||| ||||| ||| | | |||| Sbjct 118509 ATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCCCCTGATCAGCAACGTTTGATCT 118568 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 |||| || || |||||||||||| | ||| | | || ||||| || |||||||||| Sbjct 118569 TTGCTGGAAAGCAATTGGAAGATGGCCGCACTCTCTCTGACTACAACATCCAAAAGGAAT 118628 Query 25228 CTACTCTTCACATGGT 25243 | || ||||| |||| Sbjct 118629 CCACCCTTCATTTGGT 118644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410770074843932