Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2275 172 6e-38 seq319 167 2e-36 seq3256 129 6e-25 seq236 113 5e-20 seq3208 111 2e-19 >seq2275 Length=1761326 Score = 172 bits (190), Expect = 6e-38 Identities = 311/454 (69%), Gaps = 3/454 (1%) Strand=Plus/Minus Query 116976 TCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCG 117035 |||| | |||||||| ||||| | || |||||| |||| || || || | || Sbjct 1159825 TCAAGAAAAAGGCCGACTGGGCTTTCCGATGGATCAGTGGCAACGAATCC---TTTGCCG 1159769 Query 117036 AGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCA 117095 | || || || ||||| || || || || || ||||||| || || |||||| | | Sbjct 1159768 AACGACTTGTCGCCTTTGCTGCTGTTGAAGGTATCTTCTTCTCTGGTGCATTCGCCTCTA 1159709 Query 117096 TATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCT 117155 | |||||||||||||| || || | ||||| ||| |||| ||| |||||| || ||| Sbjct 1159708 TCTTTTGGCTCAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAACTGATCA 1159649 Query 117156 CCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGC 117215 | | ||||| || || || |||||||||||| ||||| ||||| ||| | | | Sbjct 1159648 GCCGAGACGAAGGCCTTCACACCGACTTTGCCTGCTTGCTATTCAACCATCTCCACTACC 1159589 Query 117216 GACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCT 117275 ||| ||| || || ||| || ||| | ||| || ||||||||||| ||| | Sbjct 1159588 AACCTAGCCACGCCCGAGTCCTTGAAATCATTGTCGAAGCCGTCGCCATCGAACAGGAAT 1159529 Query 117276 TCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAAT 117335 || | ||||| || || || || || | || | || | | | |||| |||| Sbjct 1159528 TCTTGACCGACGCTCTTCCTGTCGCCCTTATCGGTATGAACTCCAAGCTTATGTGCCAAT 1159469 Query 117336 ACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACA 117395 ||||||| ||||||||||| | || ||| ||| |||| | ||||||||||| Sbjct 1159468 ACATCGAATTCGTCGCCGATCGCCTTCTGGTCGCTCTGGGTCAAGAGAAGCACTACAAAT 1159409 Query 117396 CGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 | ||||||| | ||||||||| | || ||||| Sbjct 1159408 CCACCAACCCCTTCGACTTTATGGATCTGATCTC 1159375 >seq319 Length=278629 Score = 167 bits (184), Expect = 2e-36 Identities = 315/458 (69%), Gaps = 9/458 (2%) Strand=Plus/Minus Query 116976 TCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCG 117035 |||| | ||||| || ||||| | || |||||| |||| || || || | | Sbjct 176650 TCAAGAAAAAGGCTGATTGGGCTTTCCGGTGGATCAGTGGCAACGAATCC---TTTGCTG 176594 Query 117036 AGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCA 117095 |||| || || ||||| || ||||| || || ||||||| ||||| || ||| ||| Sbjct 176593 AGCGTCTTGTCGCCTTTGCTGCCGTGGAAGGTATCTTCTTCTCGGGTGCCTTTGCCTCCA 176534 Query 117096 TATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCT 117155 | ||||||||||||||||| ||||| ||||| || |||| ||| |||||| |||||| Sbjct 176533 TCTTTTGGCTCAAGAAACGTGGCCTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCA 176474 Query 117156 CCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGC 117215 ||| ||||| || || || ||| || ||||| || ||||| ||| | | | Sbjct 176473 GCAGAGACGAAGGCCTCCACACCGATTTCGCCTGCTTACTGTTTGGCCATCTCCACAACC 176414 Query 117216 GACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCT 117275 ||| ||| | || || |||| ||| | ||| ||||| || |||||||| | Sbjct 176413 AACCTAGCCGTGACCGGGTGCGGGAAATCATTGTCGAAGCGGTGGCGATCGAGCAAGAAT 176354 Query 117276 TCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC--GATGTCGCA 117333 || | || || || || || ||| ||| | || | || | || | |||| || Sbjct 176353 TCTTGACGGACGCTCTCCCTGTGGCTCTCATTGGCATGAACT--CAACCTTAATGTGTCA 176296 Query 117334 ATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCT-GGTCGGCGCCAAGCACTACA 117392 ||||||||| ||||||||||| | || || | | || |||| | ||||||||||| Sbjct 176295 ATACATCGAATTCGTCGCCGATCGTCTCTTGGTGGCTCTCGGTC-AAGACAAGCACTACA 176237 Query 117393 ACACGCCCAACCCGCTGGACTTTATGAACCTCATCTCC 117430 || | |||| || | ||||||||| |||| |||||| Sbjct 176236 ACTCTTCCAATCCCTTTGACTTTATGGACCTGATCTCC 176199 >seq3256 Length=796958 Score = 129 bits (142), Expect = 6e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| || || | || ||||| |||||||| |||| || ||| | Sbjct 723171 AACATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTTGAATCT 723230 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 ||||| | | | |||| ||||| |||| |||| || || || || |||||| | || Sbjct 723231 TCCGACTCCATCGACAACG-TCAAGCAAAAGATTCAAGATAAGGAAGGAATCCCCCCAGA 723289 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||||||||||||| ||| ||||| || |||| || | ||||| || ||||| Sbjct 723290 CCAGCAACGACTCATCTTCGCCGGCAAGCAATTGGAAGATGGCCGCACTCTTTCTGACTA 723349 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| || ||||| | || || ||||| || Sbjct 723350 CAACATTCAAAAGGAATCTACTCTTCATCTGGT 723382 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || ||||| ||||| ||| | || || ||| || || Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| |||| || | ||||| || || |||||| | ||||| Sbjct 723462 GACTCTATCGATAACG-TCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCA 723520 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| | |||| ||| |||||||| ||||| || | ||||| ||| |||||||| Sbjct 723521 ACAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAA 723580 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 |||||| ||||| | || || ||| Sbjct 723581 CATCCAAAAGGAATCTACTCTTCAT 723605 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || ||||| |||||| | || || ||| || | Sbjct 723858 ATGCAAATCTTCGTCAAGACCCTGACTGGTAAAACAATCACCCTTGAAGTGGAATCCTCT 723917 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| | ||| |||| || | ||||| || || |||||| | ||||| Sbjct 723918 GACTCTATCGACAACG-TGAAGCAAAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCA 723976 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| | |||| ||| |||||||| ||||| || | ||||| ||| |||||||| Sbjct 723977 ACAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAA 724036 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| ||||| | || || || || || Sbjct 724037 CATCCAAAAGGAATCTACTCTTCACCTGGT 724066 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || ||||| || ||||| | || || ||| || | Sbjct 723630 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACTCTGGAAGTGGAATCCTCT 723689 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | | ||| |||| || | ||||| || || |||||| | || ||| Sbjct 723690 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGATCAG 723749 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| ||| || ||||| ||||| || | ||||| ||| ||||||||| Sbjct 723750 CAACGTTTGATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACTCTCTCTGACTACAAC 723809 Query 40870 ATCCAGAAGGA 40880 ||||| ||||| Sbjct 723810 ATCCAAAAGGA 723820 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || || || | || || ||| || | Sbjct 724314 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACTATTACTTTGGAAGTGGAATCCTCT 724373 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| |||| || | ||||| || || |||||| | ||||| Sbjct 724374 GACTCTATCGATAACG-TCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCA 724432 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| || || || ||||| || || | || || | |||||||| Sbjct 724433 GCAACGTTTGATCTTTGCCGGGAAGCAGCTCGAAGATGGTCGTACTTTGTCTGACTACAA 724492 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| || || | || || ||||| || Sbjct 724493 CATCCAAAAAGAATCTACTCTCCATCTGGT 724522 >seq236 Length=318481 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || |||||| | || || ||| || | Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| |||| |||| || ||||| |||||||| | || || Sbjct 111919 GACTCTATCGACAACG-TCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCA 111861 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || || ||||| ||||| || | ||||| ||| |||||||| Sbjct 111860 ACAACGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAA 111801 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||| || || |||| ||||| Sbjct 111800 CATCCAAAAAGAATCCACCCTGCA 111777 Score = 93.3 bits (102), Expect = 4e-14 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 40719 CAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAA 40777 ||| ||||||||| | || || ||| || | ||| | | |||| ||||| |||| | Sbjct 112178 CAAGACCATCACCCTTGAAGTGGAATCCTCTGACTCTATCGACAACG-TCAAGCAAAAGA 112120 Query 40778 TTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGC 40837 | | || ||||| |||||||| | || || ||||| || |||| || || ||||| | Sbjct 112119 TCCAAGATAAAGAAGGCATCCCTCCTGATCAACAACGTCTTATCTTTGCTGGTAAACAAC 112060 Query 40838 TGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| || | ||||| ||| |||||||||||||| || || |||| ||||| Sbjct 112059 TGGAAGATGGCCGCACGCTCTCGGACTACAACATCCAAAAAGAATCCACCCTGCA 112005 >seq3208 Length=262556 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| || ||||| | || || ||| || | Sbjct 84063 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCA 84004 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| |||| |||| || ||||| |||||||| | ||||| Sbjct 84003 GACTCTATCGACAACG-TCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCA 83945 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| || |||||||| || || || | ||||| ||| || ||||| Sbjct 83944 GCAACGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAA 83885 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 |||||| ||||| | || || || | ||| | || || | || |||| Sbjct 83884 CATCCAAAAGGAATCAACCCTACACTTGGTGCTCCGTTTACGAGGTGGCG 83835 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || |||||||| || || ||||| ||||| || | || || ||| | | Sbjct 84291 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCT 84232 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | | |||| |||| |||| || | || || || |||||||| | ||||| Sbjct 84231 GACTCCATCGACAACG-TCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCA 84173 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || || |||||||| || || | ||||| ||| ||||||||| Sbjct 84172 ACAGCGCCTTATCTTTGCCGGGAAACAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 84113 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||| || ||||| | || || ||||| ||| Sbjct 84112 CATTCAAAAGGAATCGACTCTTCATCTGGTG 84082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515184821998880