Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3256 111 1e-19 seq236 105 5e-18 seq3208 102 6e-17 >seq3256 Length=796958 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||| || ||||||||||| || |||| | || ||| Sbjct 723610 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCC 723551 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| || ||||| ||||| || |||||||| || || | ||| |||||||| Sbjct 723550 AGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGG 723491 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || |||||||| || | | ||| ||||| |||| |||||| |||||| Sbjct 723490 ATCTTTTGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTG 723431 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| |||||||||||||| Sbjct 723430 CCAGTCAAGGTCTTGACAAAGATTTGCAT 723402 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||| |||||||||||||| || ||| | || |||| ||| || |||||||| Sbjct 723364 TCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAATTGCTTGCCGGCGAAG 723305 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | || || ||||| || || | || ||||| || ||| |||||||| || Sbjct 723304 ATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGAATCTTTTGCTTGACGTTG 723245 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | ||| | || || || | || || |||||||| |||| ||||| || Sbjct 723244 TCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACG 723185 Query 45326 AAGATTTGCATGTTG 45340 ||||||||||||||| Sbjct 723184 AAGATTTGCATGTTG 723170 >seq236 Length=318481 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||| ||||||||||| || || ||| | || ||| Sbjct 112583 ACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCC 112642 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| ||||| || || | || |||||||| ||||| | ||| |||||||| | Sbjct 112643 AGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 112702 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || |||||||| || | | | ||| ||||| || | ||| || |||||| Sbjct 112703 ATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTG 112762 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || || || ||||| || |||||||||||| || Sbjct 112763 CCTGTAAGCGTCTTGACGAAGATTTGCATGGTG 112795 >seq3208 Length=262556 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||| ||||||||||||||| ||| ||| | || || || ||||| ||||| || Sbjct 84101 TCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGTTTCCCGGCAAAG 84160 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | |||||||||||||| || | || ||||| || || ||||| || || Sbjct 84161 ATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCTTGGATCTTTTGTTTGACGTTG 84220 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | ||| | ||||| |||| ||||| |||||||| || ||||| || ||| Sbjct 84221 TCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTCTTGCCAGTAAGAGTTTTTACA 84280 Query 45326 AAGATTTGCAT 45336 ||||||||||| Sbjct 84281 AAGATTTGCAT 84291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395049497642098