Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2275 174 3e-38 seq319 114 3e-20 >seq2275 Length=1761326 Score = 174 bits (192), Expect = 3e-38 Identities = 318/464 (69%), Gaps = 15/464 (3%) Strand=Plus/Minus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || || |||| | |||| ||||||||||| |||||||| |||||||| |||||||||| Sbjct 1159775 TTTGCCGAACGACTTGTCGCCTTTGCTGCTGTTGAAGGTATCTTCTTCTCTGGTGCATTC 1159716 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 || || || || ||| ||||||| | ||| | ||||||| | |||| |||||| || Sbjct 1159715 GCCTCTATCTTTTGGCTCAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAA 1159656 Query 102023 TTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGT 102082 | || | |||||||| ||||| ||||||||| ||| |||| || || | Sbjct 1159655 CTGATCAGCCGAGACGAAGGCCTTCACACCGACTTTGCCTGCTTGCTATTCAACCA---- 1159600 Query 102083 TTTGTTGATACCCCATCAAG---AGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGTC 102136 | | | || | | || | | | |||||| |||||| ||||||||| Sbjct 1159599 --TCTCCACTACCAACCTAGCCACGCCCGAGTCCTTGAAATCATTGTC---GAAGCCGTC 1159545 Query 102137 CGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGC 102196 || ||||| ||||| | || | | || ||||| | | || ||||||| | Sbjct 1159544 GCCATCGAACAGGAATTCTTGACCGACGCTCTTCCTGTCGCCCTTATCGGTATGAACTCC 1159485 Query 102197 AAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTA 102256 ||| | ||| |||| ||||| ||||| || || ||| || |||| | |||| | | Sbjct 1159484 AAGCTTATGTGCCAATACATCGAATTCGTCGCCGATCGCCTTCTGGTCGCTCTGGGTCAA 1159425 Query 102257 GAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAAT 102316 || |||||||| || |||||||||||| || ||||| || || ||| | Sbjct 1159424 GAGAAGCACTACAAATCCACCAACCCCTTCGACTTTATGGATCTGATCTCTCTCCAAGGC 1159365 Query 102317 AAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGC 102360 || ||||||||||||||||| | ||| |||| ||||||||||| Sbjct 1159364 AAAACCAACTTTTTTGAAAAACGTGTCTCCGATTATCAACGTGC 1159321 >seq319 Length=278629 Score = 114 bits (126), Expect = 3e-20 Identities = 297/451 (66%), Gaps = 15/451 (3%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| ||||||||||| || ||||| |||||||| ||||| || || ||||| || | Sbjct 176587 TTGTCGCCTTTGCTGCCGTGGAAGGTATCTTCTTCTCGGGTGCCTTTGCCTCCATCTTTT 176528 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || | |||||||| | |||| |||||| || |||| || | Sbjct 176527 GGCTCAAGAAACGTGGCCTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCAGCAGAG 176468 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 ||||||| || || ||| || || ||| | ||||| || | | | | || Sbjct 176467 ACGAAGGCCTCCACACCGATTTCGCCTGCTTACTGTT------TGGCCATCTCCACAACC 176414 Query 102096 CATCAA---GAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149 | | | | || || | | ||| |||||| ||||| || || || |||| Sbjct 176413 AACCTAGCCGTGACCGGGTGCGGGAAATCATTGTC---GAAGCGGTGGCGATCGAGCAAG 176357 Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209 |||| | || | | || ||||| | | || ||||||| | || ||| | | Sbjct 176356 AATTCTTGACGGACGCTCTCCCTGTGGCTCTCATTGGCATGAACTCAACCTTAATGTGTC 176297 Query 102210 AGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATA 102269 | ||||| ||||| || || ||| || ||||| | | || | ||| |||||||| | Sbjct 176296 AATACATCGAATTCGTCGCCGATCGTCTCTTGGTGGCTCTCGGTCAAGACAAGCACTACA 176237 Query 102270 ATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTT 102329 | | |||| ||||| || |||||| || ||||| | ||||| ||||| | Sbjct 176236 ACTCTTCCAATCCCTTTGACTTTATGGACCTGATCTCCCTTCAAGGCAAGACAAACTTCT 176177 Query 102330 TTGAAAAGAGAGTCGCCGAGTATCAACGTGC 102360 | ||||| | ||| |||| ||||||||||| Sbjct 176176 TCGAAAAACGTGTCTCCGATTATCAACGTGC 176146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989516319257790