Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1090 104 2e-17 seq319 100 3e-16 >seq1090 Length=283134 Score = 104 bits (114), Expect = 2e-17 Identities = 735/1179 (62%), Gaps = 11/1179 (1%) Strand=Plus/Minus Query 37378 TATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAA 37437 ||||| ||||||| |||| || ||| | |||||| | ||| | || ||||| Sbjct 230078 TATGTTTCATAAGCACCGTCTTGTTGAGCCAATTCGCATGACGCTTCCAAAGCTGCATAG 230019 Query 37438 TATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAG 37497 || || ||||| || || ||| || | | |||| || || ||| || || | ||| Sbjct 230018 TAGATGGTTTCAAAGATCTGTTGGTTGAGTTTTTTGGCCTCCTCGGATTCAAAGGGGTAG 229959 Query 37498 CCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTC 37557 | || | || || |||||||||| || || ||||||| ||| ||||| | ||| Sbjct 229958 CGCATGAGCATGAAGGCATCAGCCAAGCCTTGGACACCGAGACCAATGGGGCGATGGCGT 229899 Query 37558 TTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGA 37617 || || |||| | ||| | ||| || ||||||||||| || || || || || | | Sbjct 229898 TTGTTGGATCGTTCAGCTTCCACCACAGGGTAATAATTGATGTCGATGATCTTGTTCAAA 229839 Query 37618 TTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA--CATAA-ATACGTTATTA 37674 || || | | ||| || | | || ||| | ||| ||||| || | | || Sbjct 229838 TTCTTGGTGATGACTTTGGTGACTTGATACAGCTTCTTGAAGTCATAATATTCCCTGTTG 229779 Query 37675 TTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTA 37734 ||| | | || | ||| | |||||||| || || |||||||| | || Sbjct 229778 ACCACATACGAAGGCAGAGCGATACTGGCGAGATTACAGACGGCGACTTCATCAGGGCTA 229719 Query 37735 CTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGA 37794 ||| | ||| || ||||| || || || || | || ||||||| || |||| Sbjct 229718 GAGTATTCGACAATTTCGGTACACAGGTTGCTGCATTTGATAGTTCCCAGGTTTTGTTGA 229659 Query 37795 TTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTG-TTCTATTTG 37853 || || || ||||| | ||| || || || || | || ||||| | ||| |||| Sbjct 229658 TTAGACTTGCGGTTACATGCATCCTTGTAAAGCAT-GAAGGGGTTCCCAGTTTCAGTTTG 229600 Query 37854 AGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTAAtt--tttttC 37911 ||| || | ||| | | ||| | || || || ||||| || | | | Sbjct 229599 AGCTTCCAAAATGGCATACCACAGCTTTTGAGCCTT---GATCGTTTGACGTGCGCGGCC 229543 Query 37912 TT-TGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCC 37970 || ||| |||| | | | | | || || | ||||| ||||| ||| || Sbjct 229542 TTCCCGTTCATATTTTTCAAAAAGCGCCTCGAATTCGTCACCCCACACATCTTGTAAACC 229483 Query 37971 TGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAA 38030 ||| ||||| ||||| | || |||||||| ||| ||| || || | ||| || Sbjct 229482 AGGAGCTTCGCTAGGACAAAACAGGGACCATTCACCATTGGCTTCCACACGCTTCATGAA 229423 Query 38031 TAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTAC 38090 | |||||| | ||| | ||| || | ||| | | ||| || || || || Sbjct 229422 GAGATCAGGGATCCAGAGAGCATAGAAGAGATCACGAGCCCGGATTTCGTCTTTGCCGAC 229363 Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150 |||||| | | | ||| ||| | |||||| ||||| ||||| | ||| || | Sbjct 229362 ATTCTTGCGGAGATCCAAAAAGGTGAAGACATCAGCATGCCAAGGTTCAAGATACATGGC 229303 Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210 | || || |||| ||| | || || |||| | ||| | | | ||||| || | | Sbjct 229302 GAAAGCACCAGGTCGTTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGAC 229243 Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270 | | |||||| | |||||||| || | ||||||| |||| | || || | || | Sbjct 229242 ACGGAGCATAGGAAGAATACCATTGGAGTAGCCGTTTGTACCAGCAATGTAGGAGCCAGT 229183 Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330 || || || || || | || || || ||||| |||||| ||| || || Sbjct 229182 GGCACGGATGTTGTGGATGTTGAGCCCGATCCCGCCTGCGGTTTTTGAGATTTGCGCACA 229123 Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390 || | || || | || ||||| || ||| ||||| || | || | || || Sbjct 229122 GACCTTCAGTGTTTCGTAGATGCCTTCAATGGAGTCTTCCTTCATGGTGAGCAAGAAGCA 229063 Query 38391 ACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 | || | ||||| ||||| ||||| || ||||| || ||| || || |||| Sbjct 229062 AGAGGAGAGCTGAGGACGAGGAGTACCGGCATTGAATAAGGTTGGACTGGCGTGGGTGAA 229003 Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510 | |||||||||| ||| || ||||| || | || ||||| |||| ||||| Sbjct 229002 GTACTTTTCCGACATGAGATTGTAGGTTTCGATAGCCGAGTCGATATCTTCGCCATGAAT 228943 Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 ||| | | || | ||| | | |||||| || | ||| Sbjct 228942 ACCCACGGCCACACGCATGATAAGATGTTGAGGACGTTC 228904 >seq319 Length=278629 Score = 100 bits (110), Expect = 3e-16 Identities = 289/440 (66%), Gaps = 10/440 (2%) Strand=Plus/Plus Query 11341 TTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATACTC 11400 |||||| || || ||| |||||| || || ||||| |||| || || || || Sbjct 176151 TTGATAATCGGAGACACGTTTTTCGAAGAAGTTTGTCTTGCCTTGAAGGGAGATCAGGTC 176210 Query 11401 CATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAATAA 11460 ||||||| ||| ||||| | ||| || || || ||| | | || | Sbjct 176211 CATAAAGTCAAAGGGATTGGAAGAGTTGTAGTGCTTGTCTTGACCGAGAGCCACCAAGAG 176270 Query 11461 TCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATC 11520 | ||| ||||||||||| || || ||| ||||||| | ||||| || || ||| | Sbjct 176271 ACGATCGGCGACGAATTCGATGTATTGACACATTAAGGTTGAGTTCATGCCAATGAGAGC 176330 Query 11521 CACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATC---AATGATTAT 11577 ||| || | ||| | ||||| || || | || || ||||| || ||||||| Sbjct 176331 CACAGGGAGAGCGTCCGTCAAGAATTCTTGCTCGATCGCCACCGCTTCGACAATGATTTC 176390 Query 11578 CG--ACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCA 11635 | || | || | ||| | ||| ||| | ||| ||||| ||| || || Sbjct 176391 CCGCACCCGGTCACGGC--TAGGT--TGGTTGTGG-AGATGGCCAAACAGTAAGCAGGCG 176445 Query 11636 AAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGC 11695 ||||| || | ||||||||||| || || ||||| || || || || || || ||| Sbjct 176446 AAATCGGTGTGGAGGCCTTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAAACCAGGC 176505 Query 11696 ATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCC 11755 |||| || ||||| || | |||||| || | ||||| | ||| || ||||| || || Sbjct 176506 ATCAGGCCACGTTTCTTGAGCCAAAAGATGGAGGCAAAGGCACCCGAGAAGAAGATACCT 176565 Query 11756 TCCACAGCTGCAAATGCTAC 11775 ||||| || ||||| || || Sbjct 176566 TCCACGGCAGCAAAGGCGAC 176585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468493537682720