Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq319 89.7 5e-13 >seq319 Length=278629 Score = 89.7 bits (98), Expect = 5e-13 Identities = 211/306 (69%), Gaps = 17/306 (6%) Strand=Plus/Plus Query 14097 GTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAA 14154 || ||||| |||| ||| | | ||| || || || | ||||| || | || || | Sbjct 176779 GTCTCAATGGCATCAAACAGGTTTTCTTTTTCCACAGGGTCCTTGATAT--AAGTGTCGA 176836 Query 14155 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGC 14214 | | |||||||| |||||| || |||||||| || || || || ||||| |||| Sbjct 176837 TCAACAAGCTATAGGTTTCAGCATGGATGTTTTCAATCATGATTTGGAATCCATAGAAGC 176896 Query 14215 ATCTAGCTTC--CGACCATTGTACTTC--CGAGTAAAATCTTTCGGCCAAATTTTCATTA 14270 || | ||||| ||| | ||| ||||| | | |||| | || | |||| |||||||| Sbjct 176897 ATTTGGCTTCAGCGATC-TTG-ACTTCATCCA-TAAAGTTTTGCA-CCAAGTTTTCATTG 176952 Query 14271 ACTATACCATCACTAGCT-GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC 14329 || |||||||| | |||| ||||| || ||||| || | |||||||| | || || Sbjct 176953 ACGATACCATC-CGAGCTTGCAAAGAAGGCCAAGATATGAGAGATAAAGTAGCGTTCATC 177011 Query 14330 ATTGTTGAGTTTTTT---CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGT 14386 | ||| | || || ||| || | |||||||||||||| | ||| || | || Sbjct 177012 GTCGTTCATCTTGTTTTCCCAGTCATTTGTGTCCTTAGAAAGATCGATTTCTTCGGCGGT 177071 Query 14387 CCAAAA 14392 |||||| Sbjct 177072 CCAAAA 177077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479695990149200