Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3740 100 4e-16 seq319 96.9 5e-15 >seq3740 Length=327319 Score = 100 bits (110), Expect = 4e-16 Identities = 139/191 (73%), Gaps = 8/191 (4%) Strand=Plus/Minus Query 70050 TCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGG 70109 |||||||| |||||| || |||| || || || || || ||||| ||| | |||| | Sbjct 127682 TCACCGAC-GACAAGGGG---ATCTTGGACCTGTCTATGGCTTCCAATGGCGACACTTTG 127627 Query 70110 GCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGA 70169 | | | ||||| ||||| || ||||||||| | || || ||||| |||||||| || Sbjct 127626 GAGCTGACTATGTTGACTGTGATACAGACTATACTGGACAAGGTGTGGATCAATTACAAG 127567 Query 70170 CAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTA--ATGTGCTCATG 70227 || |||| || || |||||| |||||| || || | | ||| | || |||| || Sbjct 127566 CAGTCATCGATACCATCAAGAACAATCCTACTGACCGCCGCATCATTCTATCTGCT--TG 127509 Query 70228 GAATCCTGCAG 70238 ||||||||||| Sbjct 127508 GAATCCTGCAG 127498 >seq319 Length=278629 Score = 96.9 bits (106), Expect = 5e-15 Identities = 179/260 (69%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| || | ||||| ||| | | |||||||||||||| | |||||| ||||||| Sbjct 177110 ATCTGGCAATTCTACAAGAAGCATGAAGCCTCCTTTTGGACCGCCGAAGAAATCGATCTT 177051 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || |||||| | || ||||| | ||| || ||| || | ||||| || Sbjct 177050 TCTAAGGACACAAATGACTGGGAAAACAAGATGAACGACGATGAACGCTACTTTATCTCT 176991 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 || || |||||||||||||| |||| ||||| |||||||| || || || || || | Sbjct 176990 CATATCTTGGCCTTCTTTGCAAGCTCGGATGGTATCGTCAATGAAAACTTGGTG-CAAAA 176932 Query 125199 TTCTCT-CAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 | | | | || | | || | || | ||||| || ||||||||||||||||| Sbjct 176931 CTTTATGGATGAAGTCAAGATCGCTGAAGCCAAATGCTTCTATGGATTCCAAATCATGAT 176872 Query 125258 TGAGAACGTGCACTCGGAAA 125277 ||| ||| | || | |||| Sbjct 176871 TGAAAACATCCATGCTGAAA 176852 Score = 91.5 bits (100), Expect = 2e-13 Identities = 323/496 (65%), Gaps = 28/496 (6%) Strand=Plus/Minus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 ||||||||| | |||| | ||||||||| || | || | || | || || | Sbjct 176645 AAAAAGGCTGATTGGGCTTTCCGGTGGATCAGTGGCAACGAATCCTTT---GCTGAGCGT 176589 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || || || ||||| || || |||||||| |||||| ||||| |||||||| Sbjct 176588 CTTGTCGCCTTTGCTGCCGTGGAAGGTATCTTCTTCTCGGGTGCCTTTGCCTCCATCTTT 176529 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||||||||| || || || ||||| || |||| | ||||| | || || Sbjct 176528 TGGCTCAAGAAACGTGGCCTGATGCCTGGTTTGACCTTCTCCAACGAACTCATCAGCAGA 176469 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG 125606 ||||| ||||| ||| || || ||| |||||||| || | || | | Sbjct 176468 GACGAAGGCCTCCACACCGATTTCGCCTGCTTACTGTTTGGC---------CATCTCCAC 176418 Query 125607 TGCAGATCCAGCGATGAAAAGGT-CATCAA--CATTGTAACCGATGCCGTGAGGATAGAA 125663 | | | ||| ||| ||| | || |||||| ||| || ||| ||| || Sbjct 176417 AACCAACCTAGCCGTGACCGGGTGCGGGAAATCATTGT---CGAAGCGGTGGCGATCGAG 176361 Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC-TAAT 125722 ||||| || | || || | || || || | ||||||||||||| ||| | |||| Sbjct 176360 CAAGAATTCTTGACGGACGCTCTCCCTGTGGCTCTCATTGGCATGAACT-CAACCTTAAT 176302 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCC---GCAA 125779 ||| | ||||| || || || || |||||||| || | | | || | ||| Sbjct 176301 GTGTCAATACATCGAATTCGTCGCCGATCGTCTCTTG---GTGGCTCTCGGTCAAGACAA 176245 Query 125780 GATTTACAACGCCAAGAATCCCTTTGATTTCAT-GACCAGCATATCACTAGAGGGTAAGA 125838 | |||||| | ||||||||||| || || |||| | || || || | || |||| Sbjct 176244 GCACTACAACTCTTCCAATCCCTTTGACTTTATGGACCTG-ATCTCCCTTCAAGGCAAGA 176186 Query 125839 CCAACTTTTTCGAGAA 125854 | ||||| ||||| || Sbjct 176185 CAAACTTCTTCGAAAA 176170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741009752824880