Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq3256 102 6e-17 seq236 95.1 9e-15 seq3208 82.4 6e-11 >seq3256 Length=796958 Score = 102 bits (112), Expect = 6e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| |||||||| || || || ||||| |||||||| || || | | | ||||| Sbjct 723611 AACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTC 723552 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||||||||||||| | ||||| ||||||||||| || || ||||| ||||| Sbjct 723551 CAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTG 723492 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || | || || | ||| ||| || || ||||||||||| || Sbjct 723491 GATCTTTTGCTTGACGTTATCGATAGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTT 723432 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| || || ||||| ||||||||| Sbjct 723431 GCCAGTCAAGGTCTTGACAAAGATTTGCATA 723401 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||| || || |||||||| |||||||| || || | | | ||||| Sbjct 724295 AACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTC 724236 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 |||||||| |||||| | ||||||||||||||||| || || ||||| ||||| Sbjct 724235 CAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTG 724176 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| ||| | || || | || ||| || || | || || || || Sbjct 724175 GATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGATTGTCTT 724116 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| |||| || || ||||| ||||||||| Sbjct 724115 ACCAGTCAAGGTCTTCACAAAGATTTGCATA 724085 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || || ||||| |||||||| || || | | | ||||| | |||| Sbjct 724060 TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGACCATCTTCCAGTTGT 724001 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||||||| | ||||| ||||||||||| || |||||||| ||||| || || Sbjct 724000 TTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATCTTT 723941 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || || | || ||| || || | ||| || |||||||| ||| Sbjct 723940 TGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTTTTACCAGTC 723881 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 || || || || || ||||||||| Sbjct 723880 AGGGTCTTGACGAAGATTTGCATA 723857 >seq236 Length=318481 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| |||||||| ||||| || ||||| ||||||||||| || | | | ||||| Sbjct 112582 AACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTC 112641 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||||||||| || | || | |||||||||||| ||||| ||||| ||||| Sbjct 112642 CAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 112701 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| | || |||| || ||| || || | ||| || || || Sbjct 112702 AATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTT 112761 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| || || || || || |||||||| Sbjct 112762 GCCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 >seq3208 Length=262556 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 |||||| || || || ||||| |||||||| ||| || | | | ||||| | || Sbjct 84088 ATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTG 84147 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | || | || ||||||||| ||| || ||||| || || || || Sbjct 84148 TTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTATCTTGGATCTT 84207 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 || || | || |||| || | ||| || || || |||||||| || || || Sbjct 84208 TTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACTTCCAATGTAATGGTCTTGCCAGT 84267 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 |||||||||||||| ||||||||| Sbjct 84268 AAGAGTTTTTACAAAGATTTGCATA 84292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362155637753058