Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq3208 96.9 2e-15 seq3256 82.4 5e-11 >seq3208 Length=262556 Score = 96.9 bits (106), Expect = 2e-15 Identities = 169/246 (69%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 33128 CATATCCAA----TCTTCACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTT 33183 ||||||||| ||||| || |||| ||| || | |||||| || | || || || || Sbjct 83818 CATATCCAAGGTCTCTTCGCCACCTCGTAAACGGAGCACCAAGTGTAGGGTTGATTCCTT 83877 Query 33184 TTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAA 33243 ||| || ||||||||||| | | || | || || | ||| || || ||| || | Sbjct 83878 TTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCTAGTTGTTTGCCTGCAAAGATGAG 83937 Query 33244 ACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAAT 33303 ||||||||||| | || ||||||||||| || |||| || || || | | || Sbjct 83938 CCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGAT 83997 Query 33304 CGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAAT 33363 | ||| || || || |||||||| || || || || || | ||| || ||||| || Sbjct 83998 AGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGAT 84057 Query 33364 TTGCAT 33369 ||||| Sbjct 84058 CTGCAT 84063 >seq3256 Length=796958 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||| ||| | || || || ||||| || ||||| ||||| | | || | || ||| Sbjct 723382 ACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 723323 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 |||||||| || || || | ||||||||||| | ||| || ||||| || || | Sbjct 723322 AATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGA 723263 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 ||| || || || | | || | |||| | || ||| || ||||| || || || Sbjct 723262 ATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTG 723203 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT 33375 || || | || || ||||| ||||||||||| || Sbjct 723202 CCAGTCAAGGTCTTGACGAAGATTTGCATGTTGAT 723168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318756861325524