Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq3208 98.7 7e-16 seq3256 89.7 4e-13 >seq3208 Length=262556 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGT 43970 |||||| ||||| || || ||||| || || ||||| | | || || |||| | Sbjct 83854 CACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTG-CGACCATCTT 83912 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 | | |||||| |||||||| || | |||||||||||| |||| | |||||||||||| Sbjct 83913 CTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTT 83972 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||| ||||| ||||| | | | || |||| | ||||| || | || || || | Sbjct 83973 GAATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCT 84032 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || || |||||||| || || || ||||| Sbjct 84033 TGCCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 >seq3256 Length=796958 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| ||||||||||| || || || ||||| ||||| ||||| | || | |||||| | Sbjct 724242 CATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCT 724183 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 | ||| || ||||| || || | | | || || | | ||||| || | || | Sbjct 724182 TGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCACTTCCAGAGTGA 724123 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||| ||||| || || ||||||||||| |||||||| Sbjct 724122 TTGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354754519278024