Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq3208 107 2e-18 seq236 98.7 8e-16 seq3256 87.8 2e-12 >seq3208 Length=262556 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||||||| | | |||||| ||||| || ||||| ||||| ||||||||||| Sbjct 83837 CCACCTCGTAAACGGAGCACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAG 83896 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| | ||||||||| ||| | || |||| || || || || Sbjct 83897 AGAGTGCGACCATCTTCTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGG 83956 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||| || ||| ||||| || || | | | | ||| || | |||| | Sbjct 83957 ATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACT 84016 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || || || ||||| ||||| || ||||| || || ||||| Sbjct 84017 TCCAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 >seq236 Length=318481 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || || ||||||||||| |||||||| || | || ||||||| Sbjct 111771 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTGCGGCCATCTTCC 111830 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| | ||||| | |||||||| || | ||||||||| || | Sbjct 111831 AGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGGGATGCCTTCTTTATCTTGA 111890 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || ||||| || || | | | | ||| || | |||| ||| | ||| || || ||| Sbjct 111891 ATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTG 111950 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || |||| || |||||||| |||||||| Sbjct 111951 CCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| || || ||||| ||||| ||||||||||| | || ||||||| Sbjct 112583 ACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCC 112642 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||||||||| ||| | || || | ||||| || || | ||||| ||||| | Sbjct 112643 AGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 112702 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || ||||| || || | | | | || || | |||| ||| | ||| || || ||| Sbjct 112703 ATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACTTCAAGGGTGATTGTCTTG 112762 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | ||| ||||| || |||||||| Sbjct 112763 CCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 >seq3256 Length=796958 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || |||||||||||||| |||||||| || | || ||||||| Sbjct 724294 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGCGTACGGCCATCTTCC 724235 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 |||||||| || || | || | | ||||| || ||| | ||||| ||||| Sbjct 724234 AATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCCTTGTCTTGG 724175 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGG-TTCCGTTTCCACGGTAATGGTTTT 20178 || ||||| ||||| | | | | ||| || | ||| |||| ||||| || || || || Sbjct 724174 ATCTTTTGCTTCACATTGTCGATAGAGTC-CGAGGATTCCACTTCCAGAGTGATTGTCTT 724116 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||||| || || ||||| |||||||| Sbjct 724115 ACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||| ||| || |||||||| ||||| |||||||| || | ||| ||||||| Sbjct 723382 ACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 723323 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 ||||| ||||| || | || || | || || || ||| | ||||| || || | Sbjct 723322 AATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGA 723263 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || ||||| || || | | | | || ||| || ||| ||| | || ||||| ||| Sbjct 723262 ATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTG 723203 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || ||||| || ||||| || |||||||| || Sbjct 723202 CCAGTCAAGGTCTTGACGAAGATTTGCATGTT 723171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419559902967978