Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4995 194 3e-45 seq2740 194 3e-45 seq2224 194 3e-45 >seq4995 Length=460535 Score = 194 bits (214), Expect = 3e-45 Identities = 203/264 (77%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 16437 AGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 |||||||||| | ||| |||||| || ||||| ||||| || |||||||| ||||| ||| Sbjct 8421 AGCGTCATCGTAAGAT-TCTTCGTGACAACATTCAAGGTATTACCAAGCCTGCTATTCGT 8479 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||| |||||||||||||| || |||||| |||| || | |||| ||||| | ||| Sbjct 8480 CGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGTCTCATCTACGAAGAAACCCGT 8539 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| | ||| ||||| | | | |||||||| |||||| || ||| || || || Sbjct 8540 GGTGTCCTCAAGGTCTTCTTGGAAAACGTTATCCGTGATGCCGTCACCTACACTGAACAT 8599 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 || || | |||||||||||||| |||| |||||||||| | || |||||||||||| Sbjct 8600 GCCAAGAGAAAGACTGTCACCTCTTTGGACGTCGTCTATGCTCTCAAGCGTCAAGGCCGT 8659 Query 16676 AAGATTTATGGTTTTGGAAGTTAA 16699 | | |||||||| || ||||| Sbjct 8660 ACCCTCTATGGTTTCGGTGGTTAA 8683 Score = 194 bits (214), Expect = 3e-45 Identities = 203/264 (77%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 16437 AGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 |||||||||| | ||| |||||| || ||||| ||||| || |||||||| ||||| ||| Sbjct 93542 AGCGTCATCGTAAGAT-TCTTCGTGACAACATTCAAGGTATTACCAAGCCTGCTATTCGT 93600 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||| |||||||||||||| || |||||| |||| || | |||| ||||| | ||| Sbjct 93601 CGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGTCTCATCTACGAAGAAACCCGT 93660 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| | ||| ||||| | | | |||||||| |||||| || ||| || || || Sbjct 93661 GGTGTCCTCAAGGTCTTCTTGGAAAACGTTATCCGTGATGCCGTCACCTACACTGAACAT 93720 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 || || | |||||||||||||| |||| |||||||||| | || |||||||||||| Sbjct 93721 GCCAAGAGAAAGACTGTCACCTCTTTGGACGTCGTCTATGCTCTCAAGCGTCAAGGCCGT 93780 Query 16676 AAGATTTATGGTTTTGGAAGTTAA 16699 | | |||||||| || ||||| Sbjct 93781 ACCCTCTATGGTTTCGGTGGTTAA 93804 >seq2740 Length=324 Score = 194 bits (214), Expect = 3e-45 Identities = 203/264 (77%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 16437 AGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 |||||||||| | ||| |||||| || ||||| ||||| || |||||||| ||||| ||| Sbjct 57 AGCGTCATCGTAAGAT-TCTTCGTGACAACATTCAAGGTATTACCAAGCCTGCTATTCGT 115 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||| |||||||||||||| || |||||| |||| || | |||| ||||| | ||| Sbjct 116 CGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGTCTCATCTACGAAGAAACCCGT 175 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| | ||| ||||| | | | |||||||| |||||| || ||| || || || Sbjct 176 GGTGTCCTCAAGGTCTTCTTGGAAAACGTTATCCGTGATGCCGTCACCTACACTGAACAT 235 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 || || | |||||||||||||| |||| |||||||||| | || |||||||||||| Sbjct 236 GCCAAGAGAAAGACTGTCACCTCTTTGGACGTCGTCTATGCTCTCAAGCGTCAAGGCCGT 295 Query 16676 AAGATTTATGGTTTTGGAAGTTAA 16699 | | |||||||| || ||||| Sbjct 296 ACCCTCTATGGTTTCGGTGGTTAA 319 >seq2224 Length=1126757 Score = 194 bits (214), Expect = 3e-45 Identities = 203/264 (77%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 16437 AGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 |||||||||| | ||| |||||| || ||||| ||||| || |||||||| ||||| ||| Sbjct 990610 AGCGTCATCGTAAGAT-TCTTCGTGACAACATTCAAGGTATTACCAAGCCTGCTATTCGT 990552 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 ||||| |||||||||||||| ||||||||| ||||||| | |||| ||||| | ||| Sbjct 990551 CGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATCTACGAAGAAACCCGT 990492 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 | ||| | ||| ||||| | | | ||| |||| ||||||| || ||| || || || Sbjct 990491 GGTGTCCTCAAGGTCTTCTTGGAAAACGTGATCCGTGATGCTGTCACCTACACTGAACAT 990432 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 || || | ||||||||||| || ||||| | |||||||| | || |||||||| ||| Sbjct 990431 GCCAAGAGAAAGACTGTCACTTCTTTGGATGTTGTCTATGCTCTCAAGCGTCAAGGTCGT 990372 Query 16676 AAGATTTATGGTTTTGGAAGTTAA 16699 | | |||||||| || ||||| Sbjct 990371 ACCCTCTATGGTTTCGGCGGTTAA 990348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070319429234