Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq209 165 1e-35 seq3466 118 2e-21 >seq209 Length=213014 Score = 165 bits (182), Expect = 1e-35 Identities = 359/532 (67%), Gaps = 4/532 (1%) Strand=Plus/Minus Query 193639 AACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGC 193698 |||| |||| ||||| || | ||||| ||| ||| || || || || ||||| ||| Sbjct 63012 AACCCACTGAAATCTACAACTTGGGTGCCCAATCTCACGTCAAGGTGTCTTTTGATATGT 62953 Query 193699 CAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTA 193758 | || || ||| | |||| |||||| | || ||| | | |||| || || | || | Sbjct 62952 CTGAATACACTGGTGATGTCGATGCTCTCGGTACTTTGCGTTTACTGGATGCCATCCGAA 62893 Query 193759 TGTTGGGAATGG-AGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGT 193817 | || || ||| | ||| || |||| || || || || ||| | |||||| Sbjct 62892 CCTGTGGTTTGACAGATCG-TGTGCGTTTCTACCAAGCCTCCACTTCTGAATTATATGGT 62834 Query 193818 GGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGT 193877 || | | || || | | |||||||| || || | || ||||||||||||||| Sbjct 62833 AAAGTAGTGGAAACCCCTCAAAAGGAAACCACCCCCTTCTACCCTCGCTCTCCTTATGGT 62774 Query 193878 GTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCAC 193937 || || ||| | |||||||| ||||| || || || ||||| ||||| | || Sbjct 62773 GTGGCCAAGCTCTATGGTTACTGGATTGTCGTCAACTACCGTGAATCATACAACATGTAC 62714 Query 193938 GCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACT 193997 || || ||||| |||||||| |||||||| || | | || || ||||| || Sbjct 62713 GCCTGTAACGGTATCCTCTTCAACCACGAATCCCCTCGCCGTGGCCGTACCTTTGTGACC 62654 Query 193998 CGTAAGATTACACAAGG-TTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCT 194056 |||||||| | ||||| | | || | ||| | |||| || | ||| || || Sbjct 62653 CGTAAGATCTC-CAAGGCTGTGGCTGATATCCATCTTGGTCGTCAAGACTGTCTCTACCT 62595 Query 194057 TGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTG 194116 ||||| | |||||||| | |||||||| || || ||| || ||||||| ||||| Sbjct 62594 CGGTAACATCGATGCTAAGCGTGATTGGGGTCATGCTCGGGACTACGTTGAAGGCATGTG 62535 Query 194117 GTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 | | ||||||||||| ||| |||| || || | |||| | || || |||||| Sbjct 62534 GCTGATGTTGCAACAAGATCAACCTGAAGACTTTGTGTTGGCCACTGGTGAA 62483 >seq3466 Length=2213 Score = 118 bits (130), Expect = 2e-21 Identities = 323/495 (65%), Gaps = 0/495 (0%) Strand=Plus/Plus Query 193674 CATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACT 193733 || || || || ||||| || ||| | || || ||| | |||| |||||| | || || Sbjct 283 CACGTCAAGGTGTCCTTCGATATGTCTGAATACACTGGTGATGTAGATGCTCTCGGCACC 342 Query 193734 CTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCTATCAG 193793 ||| | | | || || | |||| | || || | ||| ||| |||| || Sbjct 343 CTTCGTCTGTTAGATGCCATCCGTACCTGTGGTCTGACCGATCGTGTGCGCTTCTACCAA 402 Query 193794 GCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCA 193853 || || ||| |||||||| || ||| | | || || | | |||||||| || Sbjct 403 GCCTCCACCTCTGAACTGTACGGCAAGGTTGTGGAAACCCCGCAAAAGGAAACCACCCCC 462 Query 193854 TTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAAT 193913 || | || |||||||| || ||||| || ||| | || ||||| ||||| || || Sbjct 463 TTCTACCCCCGCTCTCCCTACGGTGTGGCCAAGCTCTACGGTTACTGGATTGTCGTCAAC 522 Query 193914 TATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCA 193973 || ||||| ||||| | |||| || ||||| |||||||| ||||||||||| Sbjct 523 TACCGTGAATCATACAACATGTACGCCTGTAACGGTATCCTCTTCAACCACGAATCTCCC 582 Query 193974 AGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTT 194033 | | || || ||||| || || ||||| | | | | | | ||| | | Sbjct 583 CGCCGTGGCCGCACGTTTGTCACCCGCAAGATCTCCCGTGCCGTGGCCGATATCCATCTC 642 Query 194034 GGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCA 194093 || || | ||| ||||| ||||| || |||| ||| | |||||||| || || Sbjct 643 GGTCGTCAAGAATGTCTGTATCTCGGTAACATTGATGCCAAGCGTGATTGGGGCCATGCG 702 Query 194094 AAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTG 194153 || ||||| |||| |||||||| ||| |||| || || |||||||| || | ||| Sbjct 703 CGTGACTATGTCGAAGGCATGTGGTTGATGCTGCAGCAAGACGAACCCGAAGACTTTGTC 762 Query 194154 ATTGCTACAGGTGAA 194168 | || || || ||| Sbjct 763 CTGGCCACTGGCGAA 777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807501315879280