Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2275 140 3e-28 seq3256 134 1e-26 seq236 122 8e-23 seq3208 116 4e-21 seq319 104 2e-17 seq304 104 2e-17 seq1528 100 3e-16 >seq2275 Length=1761326 Score = 140 bits (154), Expect = 3e-28 Identities = 246/354 (69%), Gaps = 17/354 (5%) Strand=Plus/Plus Query 119655 ACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAA 119714 ||||||||||||||||| || || ||||| | ||||| || || |||||| ||||| Sbjct 1159339 ACACGTTTTTCAAAAAAGTTGGTTTTGCCTTGGAGAGAGATCAGATCCATAAAGTCGAAG 1159398 Query 119715 GGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACA 119774 || || | | ||| | ||||| || | |||| ||| || || ||||| || || Sbjct 1159399 GGGTTGGTGGATTTGTAGTGCTTCTCTTGACCCAGAGCGACCAGAAGGCGATCGGCGACG 1159458 Query 119775 AACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGC 119833 || |||||||||| |||||| | ||| || ||||| || | | ||||| || | ||| Sbjct 1159459 AATTCGATGTATTGGCACATAAGCTTG-GAGTTCATACCGATAAGGGCGACAGGAAGAGC 1159517 Query 119834 ATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATACTCAACACCTTGGT 119893 | ||| ||||| |||| ||| ||| |||| ||||| |||| || |||| || || Sbjct 1159518 GTCGGTCAAGAATTCCTGTTCGATGGCGACGGCTTCGACAATGAT-TTCAAGGACTCGGG 1159576 Query 119894 CTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATAG---ACAAGCAAAGTC 119950 | ||| || ||| | | ||| || || | |||| || |||||||| Sbjct 1159577 CGTGGCTAGGTTGGTAGT----GGA-------GATGGTTGAATAGCAAGCAGGCAAAGTC 1159625 Query 119951 GGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGCCGGG 120004 |||||| || |||||||||| | || ||||||||| | | |||||||| || Sbjct 1159626 GGTGTGAAGGCCTTCGTCTCGGCTGATCAGTTCGTTGGAGAAGGTCAAGCCAGG 1159679 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||| | ||||| | ||||| |||||||| ||||| ||||| || ||||| ||||| Sbjct 759372 CGACTCTATCGACAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCTCCTGATCA 759313 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | | ||||| ||||||||||| | | | | ||||| || Sbjct 759312 GCAACGTCTTATCTTTGCTGGCAAGCAACTCGAAGACGGCCGTACTTTGTCTGACTACAA 759253 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||||| ||||| ||| | || ||||||| Sbjct 759252 CATTCAAAAGGAATCCACTCTTCACTTGGTCCT 759220 >seq3256 Length=796958 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 || ||| |||||| | || || || || || ||||| || | ||||| ||||| | || Sbjct 723167 AATCAACATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTTGA 723226 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 ||| |||| ||||||| | ||||| ||||||||| || || ||||| || || || Sbjct 723227 ATCTTCCGACTCCATCGACAACGTCAAGCAAAAGATTCAAGATAAGGAAGGAATCCCCCC 723286 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 || || ||| ||||||| | || |||||| ||| | ||||||| | | | || Sbjct 723287 AGACCAGCAACGACTCATCTTCGCCGGCAAGCAATTGGAAGATGGCCGCACTCTTTCTGA 723346 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| ||||||||||| ||||||||| | ||||||||||| Sbjct 723347 CTACAACATTCAAAAGGAATCTACTCTTCATCTGGTCCT 723385 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || ||||| || | || ||| | ||| | ||||| | Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | ||||| |||||||| ||||| ||||| || || || || ||| Sbjct 723462 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 723521 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || ||||||||||| ||||||| | | | || ||||| ||| Sbjct 723522 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 723581 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||||||| | ||| |||| || Sbjct 723582 ATCCAAAAGGAATCTACTCTTCATTTGGTTCT 723613 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | ||||| ||| | |||||| | ||| | ||||| Sbjct 723858 ATGCAAATCTTCGTCAAGACCCTGACTGGTAAAACAATCACCCTTGAAGTGGAATCCTCT 723917 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | || || |||||||| ||||| ||||| || || || || ||| Sbjct 723918 GACTCTATCGACAACGTGAAGCAAAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAA 723977 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || ||||||||||| ||||||| | | | || ||||| ||| Sbjct 723978 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 724037 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||||||| | || ||||| || Sbjct 724038 ATCCAAAAGGAATCTACTCTTCACCTGGTTCT 724069 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | ||||| || | || || | ||| | ||||| Sbjct 724314 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACTATTACTTTGGAAGTGGAATCCTCT 724373 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | ||||| |||||||| ||||| ||||| || || || || || Sbjct 724374 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 724433 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | | ||| || || |||||||||| | | | | ||||| ||| Sbjct 724434 CAACGTTTGATCTTTGCCGGGAAGCAGCTCGAAGATGGTCGTACTTTGTCTGACTACAAC 724493 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||||||| ||||||||||||| Sbjct 724494 ATCCAAAAAGAATCTACTCTCCATCTGGTCCT 724525 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || ||||| || | ||||| | ||| | ||||| Sbjct 724086 ATGCAAATCTTTGTGAAGACCTTGACTGGTAAGACAATCACTCTGGAAGTGGAATCCTCG 724145 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | || || |||||||| ||||| ||||| || || || || ||| Sbjct 724146 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 724205 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || || |||||| | ||||||| | | || ||||| ||| Sbjct 724206 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCCGTACGCTCTCTGACTACAAC 724265 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||||||| | || |||| || Sbjct 724266 ATCCAAAAAGAATCTACTCTTCACTTGGTTCT 724297 >seq236 Length=318481 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || || | |||||| | ||| | ||||| Sbjct 112791 ATGCAAATCTTCGTCAAGACGCTTACAGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 112732 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| ||||||| | ||||| ||||||||| ||||| ||||| || ||||| || ||| Sbjct 112731 GACTCCATCGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 112672 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | |||||||||||| ||||||| | | | || || || ||| Sbjct 112671 CAACGTCTCATCTTTGCCGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGATTACAAC 112612 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||| ||| | ||| |||| || Sbjct 112611 ATTCAAAAGGAATCCACTCTTCATTTGGTTCT 112580 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | ||||| || | |||||| | ||| | ||||| Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | ||||| ||||||||| || |||||||| || ||||| |||||| Sbjct 111919 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCAA 111860 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | ||| |||||||| ||||||| | | || ||||| ||| Sbjct 111859 CAACGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAAC 111800 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| || | || ||||||| Sbjct 111799 ATCCAAAAAGAATCCACCCTGCACTTGGTCCT 111768 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 |||||| | ||| | ||||| ||| | ||||| | ||||| |||||||| || Sbjct 112171 ATCACCCTTGAAGTGGAATCCTCTGACTCTATCGACAACGTCAAGCAAAAGATCCAAGAT 112112 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 |||||||| || ||||| ||||||||| | || || | | || |||||||| |||||| Sbjct 112111 AAAGAAGGCATCCCTCCTGATCAACAACGTCTTATCTTTGCTGGTAAACAACTGGAAGAT 112052 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | | | || ||||| ||||| ||||||||||| || | || ||||||| Sbjct 112051 GGCCGCACGCTCTCGGACTACAACATCCAAAAAGAATCCACCCTGCACTTGGTCCT 111996 >seq3208 Length=262556 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||||||||| | ||||| || | || || | ||| | ||||| Sbjct 84291 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCT 84232 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| ||||||| | |||||||||||||| || || ||||| || || ||||| ||| Sbjct 84231 GACTCCATCGACAACGTCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCAA 84172 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | | ||| ||||| || ||||||| | | || |||||| ||| Sbjct 84171 CAGCGCCTTATCTTTGCCGGGAAACAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 84112 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||| ||| | |||||||| || Sbjct 84111 ATTCAAAAGGAATCGACTCTTCATCTGGTGCT 84080 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| || | ||||| | ||| | ||||| Sbjct 84063 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCA 84004 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | ||||| ||||||||| || |||||||| || ||||| || || Sbjct 84003 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCAG 83944 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | ||||||||||| ||||||| | | | || || || ||| Sbjct 83943 CAACGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAAC 83884 Query 26949 ATTCAAAAAGAATCTAC 26965 || ||||| ||||| || Sbjct 83883 ATCCAAAAGGAATCAAC 83867 >seq319 Length=278629 Score = 104 bits (114), Expect = 2e-17 Identities = 235/350 (67%), Gaps = 9/350 (3%) Strand=Plus/Plus Query 119655 ACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAA 119714 ||||||||||| || || || |||||||| | ||| || || | |||||| || || Sbjct 176164 ACACGTTTTTCGAAGAAGTTTGTCTTGCCTTGAAGGGAGATCAGGTCCATAAAGTCAAAG 176223 Query 119715 GGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACA 119774 ||||| | || |||| | |||||||| | || | | | ||| || ||||| || || Sbjct 176224 GGATTGGAAGAGTTGTAGTGCTTGTCTTGACCGAGAGCCACCAAGAGACGATCGGCGACG 176283 Query 119775 AACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCA 119834 || |||||||||| ||||| | || |||||||| | | ||| || || | ||| Sbjct 176284 AATTCGATGTATTGACACATTAAGGTTGAGTTCATGCCAATGAGAGCCACAGGGAGAGCG 176343 Query 119835 TTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATACTCAACACCTTGGTC 119894 | || ||||| || | || || | |||||||| |||| || | |||| |||| Sbjct 176344 TCCGTCAAGAATTCTTGCTCGATCGCCACCGCTTCGACAATGATTTCCCGCACC-CGGTC 176402 Query 119895 TTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATAGACAAGCAAAGTCGGTG 119954 || || ||| || || || | ||| || || || || |||||| Sbjct 176403 ACGGCTAG---GTTGGTTGTGGAGATGGCCAAACAGTA----AG-CAGGCGAAATCGGTG 176454 Query 119955 TGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGCCGGG 120004 || || |||||||||||| |||||||||||| | | ||||| || || Sbjct 176455 TGGAGGCCTTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAAACCAGG 176504 >seq304 Length=62727 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | ||||| ||||||||| ||||| ||||| || ||||| ||||| Sbjct 38989 GACTCGATCGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 38930 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | |||||| ||||||||||||| | | | |||||| ||| Sbjct 38929 CAACGTCTTATCTTTGCCGGCAAGCAACTCGAAGATGGCCGTACGTTGTCCGACTACAAC 38870 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||| ||| ||||| ||||||| Sbjct 38869 ATCCAAAAGGAATCCACTCTCCATTTGGTCCT 38838 >seq1528 Length=6275 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||| ||||||| | ||||| |||||||| ||||| ||||| || ||||| ||||| Sbjct 4367 CGACTCCATCGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCTGATCA 4426 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | || ||||| ||||||||||||| | | | | |||||| || Sbjct 4427 GCAACGTCTTATCTTCGCTGGCAAGCAACTCGAAGATGGTCGCACTTTGTCCGACTACAA 4486 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| ||||| ||||| ||| | || ||||||| Sbjct 4487 CATCCAAAAGGAATCCACTCTTCACTTGGTCCT 4519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478630461251360