Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3208 118 1e-21 seq3304 113 4e-20 seq236 96.9 3e-15 seq3256 95.1 1e-14 seq2275 93.3 4e-14 >seq3208 Length=262556 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || ||||| ||||| || |||| ||| || |||||||| ||||||||||| Sbjct 83836 GCCACCTCGTAAACGGAGCACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGA 83895 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || ||||| || |||||||| |||| | || |||||||| ||||| Sbjct 83896 GAGAGTGCGACCATCTTCTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGG 83955 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| |||||||| || || || ||||||| | || | || || | ||| || | Sbjct 83956 GATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCAC 84015 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || | ||| || ||||| |||||||| Sbjct 84016 TTCCAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | ||| | ||||| ||||||||||||||||| ||| Sbjct 84065 CCACCACGAAGACGAAGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGAG 84124 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||| || || || |||| | ||||| ||||| || ||| Sbjct 84125 AGTGTGCGGCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTGGG 84184 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || || |||| | || | | || | || || | Sbjct 84185 ATGCCTTCCTTATCTTGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCACT 84244 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || || ||||||||||| || || ||||| Sbjct 84245 TCCAATGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 >seq3304 Length=726533 Score = 113 bits (124), Expect = 4e-20 Identities = 480/747 (64%), Gaps = 25/747 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||| || || || ||||| | |||||| || || | || || || ||||| Sbjct 454079 TTGACGACTTGGAATTCACCGGCAAGCACACGGCGGGTGTAGAGATTGGAGGTATAGGGT 454138 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| ||| |||||||| | || | |||||||||||| || ||| Sbjct 454139 TCGAAGCATTCGTTGAAGCCGAGGATTTGTGATGTGGAGGCGGTGGGCATGGGGGCTACC 454198 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||||||| ||||| | || || || ||| |||||| Sbjct 454199 AGGAGCGAGTTGCGGACGCCGTGCTTGGCAATGTCGGCTTTGAGAGTCGTCCAGTCCCAT 454258 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||||| | ||| ||||||||||||| |||| ||||| | | |||| | Sbjct 454259 AGATCGGTCGGTGTGACGCCCCACATGTCGTATTGCAGTTGGCCCTTGGATACAGGGCAG 454318 Query 145298 -CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGA 145354 ||| | ||| | ||| | || ||| | ||| || || || |||||||| Sbjct 454319 CCCTCGTAAGTTTC-GTA--GACACCGTGTTGCTGGGCCAGTTCACACGACGCCTCCAAT 454375 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 || | || || || || |||||| |||||| || | || || || || Sbjct 454376 GCCGCATGGTAGATGGTTTCAAAGATTTGCTGGTTGAGTCGCTTGGCCTCGGCGGATTCA 454435 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | || ||||| ||| | ||| |||||||| || ||||| | || | ||||||||| Sbjct 454436 AAGGGGTAGCGCATCAGCAAAAAGGCATCGGCCAGGCCCTGGACACCAATGCCGATGGGA 454495 Query 145475 CGAT---GTTTCATG--TTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGA 145529 |||| |||| || |||| | ||| | || ||| || ||| ||||| Sbjct 454496 CGATGACGTTTGTTGGACCGCTCGGCTTCGACCAC-----AGGGTAATAATTGATGTCGA 454550 Query 145530 TAATTTTATTCAAGT--TTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC 145587 | || || || | || || ||| || ||||| || | | |||| | ||||||| Sbjct 454551 TGATCTTGTTGAGGTTCTTGGCA--ACCACCTTGGTGACCTTGTGCAAGTGGGCAAAGTC 454608 Query 145588 -AAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAA 145646 | | | | ||||||| ||| || || |||||| || | ||||| | Sbjct 454609 GTATGTGTGGC-GGTCAACG---ACAAAGGAGGGGAGGGCGATGCTGGCGAGGTTACACA 454664 Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706 | || | || || | | | ||||| |||||||| | ||||| ||||| | | || Sbjct 454665 CGGCGATTTCGTCAGGGCTGGAGTATTCGACGATCTCTGTGCACAGGTTGCTGGAGTGGA 454724 Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766 |||| || || || || || || ||| | ||||| ||||||||||| | |||| | | Sbjct 454725 TGGTGCCTAGGTTCTGTTGGTTCGATTTACGATTGCAGGCGTCCTTGTACAACATGAATG 454784 Query 145767 GTCCGCCAGTCTCCACCTGCGTCTCCA 145793 | ||||| ||| |||| |||| Sbjct 454785 GATTCCCAGTTTCCGTTTGCGCTTCCA 454811 >seq236 Length=318481 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | || || |||||||||||||||||||| Sbjct 112565 CCACCACGGAGACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAG 112624 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || || ||||| || |||| | ||| || ||||| ||||| Sbjct 112625 AGGGTGCGGCCATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAGGA 112684 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||||| | || | | || | ||| || | Sbjct 112685 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCACT 112744 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || || || || || || ||||| || |||||| Sbjct 112745 TCAAGGGTGATTGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCATG 112792 >seq3256 Length=796958 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || |||||||| |||||||| || Sbjct 724084 CCACCACGGAGACGGAGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAG 724025 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || || || ||||| ||| |||| || || || ||||| || ||| Sbjct 724024 AGCGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGGGG 723965 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | | || | || || | ||| || | Sbjct 723964 ATTCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCACT 723905 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||||| || || || || ||||| || ||||| Sbjct 723904 TCAAGGGTGATTGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || || ||||||||||||||||| || Sbjct 723400 CCACCACGGAGACGGAGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAA 723341 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || | |||||||| ||| |||| | || |||||||| || ||| Sbjct 723340 AGAGTGCGGCCATCTTCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGG 723281 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || || || ||||||| | || | | |||| || || | Sbjct 723280 ATTCCTTCCTTATCTTGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAACT 723221 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||| || || || | || || ||||| || |||||| Sbjct 723220 TCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATG 723173 >seq2275 Length=1761326 Score = 93.3 bits (102), Expect = 4e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || || ||||||||||||||||| || | Sbjct 759205 CCACCACGGAGACGGAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 759264 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || || |||||||| || |||| | ||| ||||| || |||||| Sbjct 759265 AAAGTACGGCCGTCTTCGAGTTGCTTGCCAGCAAAGATAAGACGTTGCTGATCAGGAGGG 759324 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA 131158 || ||||| ||||| ||| || ||||||| Sbjct 759325 ATACCTTCCTTGTCTTGGATCTTTTGCTTGA 759355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471981304945920