Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq2859 140 2e-28 seq3208 125 5e-24 seq3256 116 2e-21 seq236 109 4e-19 seq2275 104 2e-17 seq3552 100 2e-16 seq197 89.7 3e-13 >seq2859 Length=1147 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 991 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1050 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1051 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1085 >seq3208 Length=262556 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||| ||||| | |||||| || || || |||||||| || ||||||||||| Sbjct 83837 CCACCTCGTAAACGGAGCACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAG 83896 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || |||| |||||| || ||||| || || ||||| || || | ||| Sbjct 83897 AGAGTGCGACCATCTTCTAGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGG 83956 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||| || ||| |||||||| || || | || || ||| ||| ||| Sbjct 83957 ATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACT 84016 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || ||||| || || ||||| || || ||||| |||||||| Sbjct 84017 TCCAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| ||||||||| ||||||||||| ||||| || | Sbjct 84063 TACCACCACGAAGACGAAGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGG 84122 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | ||||| |||||||| || ||||| ||||| |||| | Sbjct 84123 AGAGTGTGCGGCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGTG 84182 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||| || || || ||||| || || || | || | || | ||| | Sbjct 84183 GGATGCCTTCCTTATCTTGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCCA 84242 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| |||||||| || || || || | ||||| || || || ||||| Sbjct 84243 CTTCCAATGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 >seq3256 Length=796958 Score = 116 bits (128), Expect = 2e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | |||| ||||||||| ||||||||||| ||||| |||| Sbjct 723402 TACCACCACGGAGACGGAGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAG 723343 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || ||||| || ||||| || || || ||||| || || | || Sbjct 723342 AAAGAGTGCGGCCATCTTCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGG 723283 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| || || ||| |||||||| || || | || | || | ||||| Sbjct 723282 GGATTCCTTCCTTATCTTGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCAA 723223 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 |||| | || || || || || |||||||| || ||||| || |||||||| Sbjct 723222 CTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATGTT 723171 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| |||||||| || ||||| || ||||| |||| Sbjct 724314 TACCACCACGGAGACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAG 724255 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || || |||||||| || || || || | |||||||| || | || Sbjct 724254 AGAGCGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGGG 724195 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| || |||||||||||||| | || || || ||| | Sbjct 724194 GGATACCTTCCTTGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCCA 724135 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || || ||||| |||||||| ||||| || || ||||| Sbjct 724134 CTTCCAGAGTGATTGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | |||||||||||||| |||||||| || ||||| |||| Sbjct 723630 TACCACCACGGAGACGGAGAACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 723571 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | |||||| || || || || | ||||||||| || | || Sbjct 723570 AGAGCGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGG 723511 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| || |||||||| || || | || || || ||| | Sbjct 723510 GGATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTATCGATAGAGTCGGAGGATTCCA 723451 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || ||||| || || || |||||||| || || || || ||||| Sbjct 723450 CTTCCAAGGTAATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 723402 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | |||| |||||||| |||||||| || ||||| |||| Sbjct 724086 TACCACCACGGAGACGGAGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 724027 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | |||||| || || || || | ||||||||| || | || Sbjct 724026 AGAGCGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGGTCTGGGG 723967 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| || ||||||||||| || | || || || ||| | Sbjct 723966 GGATTCCTTCCTTGTCTTGGATCTTTTGCTTCACGTTGTCGATAGAGTCAGAGGATTCCA 723907 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || |||||||| |||| ||| || ||||| || ||||| Sbjct 723906 CTTCAAGGGTGATTGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| |||||||| |||||||| || ||||| |||| Sbjct 723858 TACCACCACGGAGACGGAGAACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 723799 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | |||||| || || || || | ||||| ||||| | || Sbjct 723798 AGAGAGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGGG 723739 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| || |||||||||||||| | || || || ||| | Sbjct 723738 GGATACCTTCCTTGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCCA 723679 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || || || || ||||| || || || || || ||||| Sbjct 723678 CTTCCAGAGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 723630 >seq236 Length=318481 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||||||||||||| ||||||||||| |||||||||| Sbjct 112563 TACCACCACGGAGACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAG 112622 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | |||||| |||||||| || || |||||||| || | | Sbjct 112623 AGAGGGTGCGGCCATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGAG 112682 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| ||||| ||| |||||||| ||||| | || | || ||| | Sbjct 112683 GAATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCCA 112742 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| | || || || || || || | || || ||||| || |||||| Sbjct 112743 CTTCAAGGGTGATTGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCATG 112792 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | ||||| || || ||| || ||||| || ||||| ||||| Sbjct 111752 ACCACCACGGAGACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGA 111811 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | || | || || | |||||| |||||||| || || ||||||||||| | || Sbjct 111812 GAGCGTGCGGCCATCTTCCAGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGG 111871 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||||||||| || ||| |||||||| || || | || || || ||| || Sbjct 111872 GATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCAC 111931 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| | || || || || || |||| ||| || || || || ||||| Sbjct 111932 TTCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 >seq2275 Length=1761326 Score = 104 bits (114), Expect = 2e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| ||||||||| ||||||||||| ||||| |||| Sbjct 759203 TACCACCACGGAGACGGAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAG 759262 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||||| ||| |||| || | ||| || || ||||| || || ||||| ||||| | | Sbjct 759263 ACAAAGTACGGCCGTCTTCGAGTTGCTTGCCAGCAAAGATAAGACGTTGCTGATCAGGAG 759322 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAG 38253 ||| ||||| ||||| || |||||||| || || | || || Sbjct 759323 GGATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCGATAG 759367 >seq3552 Length=904 Score = 100 bits (110), Expect = 2e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| || Sbjct 114 CTCTTTTCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTTTCGT 173 Query 20009 TAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 174 CAATATTTAGCTTTA 188 >seq197 Length=169696 Score = 89.7 bits (98), Expect = 3e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||||||||| ||| |||||||| || ||||| |||| Sbjct 118664 TACCACCACGGAGACGAAGGACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAG 118605 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || ||||| ||||| ||||| || | ||||| ||||| | || Sbjct 118604 AGAGAGTGCGGCCATCTTCCAATTGCTTTCCAGCAAAGATCAAACGTTGCTGATCAGGGG 118545 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 ||| ||||| || || || |||||||| ||||| Sbjct 118544 GGATACCTTCCTTATCTTGGATCTTTTGCTTGACATT 118508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334925409381878