Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq236 187 2e-42 seq3208 152 4e-32 seq3256 145 6e-30 seq304 131 1e-25 seq1528 116 3e-21 seq2275 105 6e-18 seq3304 104 2e-17 >seq236 Length=318481 Score = 187 bits (206), Expect = 2e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || |||| |||||||||||| || | Sbjct 112791 ATGCAAATCTTCGTCAAGACGCTTACAGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 112732 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| ||||| |||||||||||||| |||||||| || || ||| Sbjct 112731 GACTCCATCGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 112672 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||||||||| | || ||| ||||||| |||| ||||||||| Sbjct 112671 CAACGTCTCATCTTTGCCGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGATTACAAC 112612 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| |||||||| | ||||| ||| | || | || || ||| Sbjct 112611 ATTCAAAAGGAATCCACTCTTCATTTGGTTCTCCGTCTCCGTGGTGGT 112564 Score = 156 bits (172), Expect = 4e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || || |||| |||||||||||| || | Sbjct 111979 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 111920 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| | |||| ||||| |||||||| || || || || || || |||||| Sbjct 111919 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGATCAA 111860 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| |||||||| ||||| | || ||| |||||| |||| || |||||| Sbjct 111859 CAACGTCTTATCTTTGCCGGTAAACAACTGGAAGATGGCCGCACGCTCTCTGACTACAAC 111800 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||||||||||||| | || || || Sbjct 111799 ATCCAAAAAGAATCCACCCTGCACTTGGT 111771 Score = 131 bits (144), Expect = 1e-25 Identities = 132/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315 |||| |||||||||||| || | || | | ||| | |||| ||||| || ||||| | Sbjct 112170 TCACCCTTGAAGTGGAATCCTCTGACTCTATCGACAACGTCAAGCAAAAGATCCAAGATA 112111 Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375 | || || || || || ||||||||||||||||| ||||| || ||||| | || ||| Sbjct 112110 AAGAAGGCATCCCTCCTGATCAACAACGTCTTATCTTTGCTGGTAAACAACTGGAAGATG 112051 Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||| |||| || |||||||| ||||||||||||||| | || || || Sbjct 112050 GCCGCACGCTCTCGGACTACAACATCCAAAAAGAATCCACCCTGCACTTGGT 111999 >seq3208 Length=262556 Score = 152 bits (168), Expect = 4e-32 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||| | || || || || | || | ||||||||| | | Sbjct 84291 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCT 84232 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||||||||| || ||||| ||||| || || |||||||| ||| Sbjct 84231 GACTCCATCGACAACGTCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCAA 84172 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| |||||||| |||||| | || ||| |||||| ||||||| |||||| Sbjct 84171 CAGCGCCTTATCTTTGCCGGGAAACAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 84112 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| ||||| || Sbjct 84111 ATTCAAAAGGAATCGAC 84095 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| || || || || ||||||| ||||||||| || | Sbjct 84063 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCA 84004 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| | |||| ||||| |||||||| || || || || || || || || Sbjct 84003 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCAG 83944 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || ||||| |||||||| |||| ||| ||||| |||| ||||||||| Sbjct 83943 CAACGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAAC 83884 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| ||| |||| || || | || || || || || Sbjct 83883 ATCCAAAAGGAATCAACCCTACACTTGGTGCTCCGTTTACGAGGTGG 83837 >seq3256 Length=796958 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || ||||| || ||||||| ||||||||| || | Sbjct 724086 ATGCAAATCTTTGTGAAGACCTTGACTGGTAAGACAATCACTCTGGAAGTGGAATCCTCG 724145 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| || | || ||||| || ||||||||||| ||||| || || || ||| Sbjct 724146 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 724205 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || ||||| || || ||| ||| || |||| || |||||| Sbjct 724206 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGCCGTACGCTCTCTGACTACAAC 724265 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||||||||| || | || || ||| | || | || || ||| Sbjct 724266 ATCCAAAAAGAATCTACTCTTCACTTGGTTCTCCGTCTCCGTGGTGGT 724313 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| || || || || ||||||| ||||||||| || | Sbjct 723630 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACTCTGGAAGTGGAATCCTCT 723689 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| || | || ||||| || ||||||||||| ||||| || || ||||| Sbjct 723690 GACTCTATCGACAATGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGATCAG 723749 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || ||||| | || ||| |||||| |||| || |||||| Sbjct 723750 CAACGTTTGATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACTCTCTCTGACTACAAC 723809 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || ||| | || | || || ||| Sbjct 723810 ATCCAAAAGGAATCTACTCTTCACTTGGTTCTCCGTCTCCGTGGTGGT 723857 Score = 131 bits (144), Expect = 1e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||| || || || || || || || || || ||||||| ||||| ||| | Sbjct 723171 AACATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTTGAATCT 723230 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| || | ||| | |||| ||||| |||||||| ||||| || || || || || Sbjct 723231 TCCGACTCCATCGACAACGTCAAGCAAAAGATTCAAGATAAGGAAGGAATCCCCCCAGAC 723290 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||||| || || || |||||||| || || || ||| |||||| | || || ||| Sbjct 723291 CAGCAACGACTCATCTTCGCCGGCAAGCAATTGGAAGATGGCCGCACTCTTTCTGACTAC 723350 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||||||||| ||||| || Sbjct 723351 AACATTCAAAAGGAATCTAC 723370 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || || || || | || | ||||||||| || || Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | || | |||| ||||| || ||||||||||| ||||| || || || ||| Sbjct 723462 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 723521 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || |||||||| | || ||| ||||| |||| || |||||| Sbjct 723522 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 723581 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | ||||| ||| | || | || || ||| Sbjct 723582 ATCCAAAAGGAATCTACTCTTCATTTGGTTCTCCGTCTCCGTGGTGGT 723629 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || |||||||| |||| |||||||||||| || | Sbjct 723858 ATGCAAATCTTCGTCAAGACCCTGACTGGTAAAACAATCACCCTTGAAGTGGAATCCTCT 723917 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| | | || ||||| || ||||||||||| || || || || || ||| Sbjct 723918 GACTCTATCGACAACGTGAAGCAAAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAA 723977 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || |||||||| | || ||| ||||| |||| || |||||| Sbjct 723978 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 724037 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 724038 ATCCAAAAGGAATCTAC 724054 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || || | ||| | ||||||||| || | Sbjct 724314 ATGCAAATCTTTGTCAAGACCCTGACTGGCAAGACTATTACTTTGGAAGTGGAATCCTCT 724373 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | || | |||| ||||| || ||||||||||| ||||| || || || || Sbjct 724374 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 724433 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || |||||||| || ||| | || ||| || || | || || |||||| Sbjct 724434 CAACGTTTGATCTTTGCCGGGAAGCAGCTCGAAGATGGTCGTACTTTGTCTGACTACAAC 724493 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||||||||| || Sbjct 724494 ATCCAAAAAGAATCTAC 724510 >seq304 Length=62727 Score = 131 bits (144), Expect = 1e-25 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| ||||| |||||||||||||| |||||||| || ||||| ||||||||| Sbjct 38980 GACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAGCAACGTCTT 38921 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407 || ||||||||||| || | || ||| ||| || | ||||| |||||||| ||||| Sbjct 38920 ATCTTTGCCGGCAAGCAACTCGAAGATGGCCGTACGTTGTCCGACTACAACATCCAAAAG 38861 Query 22408 GAATCCACCATACATTTAGT 22427 |||||||| | ||||| || Sbjct 38860 GAATCCACTCTCCATTTGGT 38841 >seq1528 Length=6275 Score = 116 bits (128), Expect = 3e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| || | ||| || |||| ||||| || ||||||||||| |||||||| || |||| Sbjct 4366 CCGACTCCATCGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCTGATC 4425 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | ||||||||||| || || ||||| || | || ||| ||||| | ||||| |||| Sbjct 4426 AGCAACGTCTTATCTTCGCTGGCAAGCAACTCGAAGATGGTCGCACTTTGTCCGACTACA 4485 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| ||||| |||||||| Sbjct 4486 ACATCCAAAAGGAATCCAC 4504 >seq2275 Length=1761326 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354 |||| ||||| || ||||||||||| ||||| || || ||||| ||||||||||| |||| Sbjct 759355 TCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCTCCTGATCAGCAACGTCTTATCTTTG 759296 Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414 | ||||| || | || || ||| || | || || |||||||||||||| ||||||| Sbjct 759295 CTGGCAAGCAACTCGAAGACGGCCGTACTTTGTCTGACTACAACATTCAAAAGGAATCCA 759236 Query 22415 C 22415 | Sbjct 759235 C 759235 >seq3304 Length=726533 Score = 104 bits (114), Expect = 2e-17 Identities = 158/224 (71%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 128782 TCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCTGTT 128841 || |||||||| || |||||||| | || ||| ||||||| ||| |||||||| ||| Sbjct 453734 TCGACGGTAAACTTGATAGCGTCGACGGCAGGCCGTGTGCGCAGATAATACATGCCAGTT 453793 Query 128842 TTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGTTGA 128901 || | || ||||||| | | ||| || | |||||| | | ||||||| | Sbjct 453794 TTGAGCCCCTTTTTCCAGCCATAAAAGTGCATGCTTGTCAACTTTCCAAAGGTGGGGACA 453853 Query 128902 CTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCCATA 128961 | | ||| | ||| | ||||||||| |||||||| | ||||||||||| |||||| Sbjct 453854 CCGATAAAGACATTCAGGCTTTGACTTTGGTCAATAAAAGCCCCGCGATCGGCCGCCATA 453913 Query 128962 CCAATCAAATT---TTTCACTTTCATTTCCCACACCGTTTTGTA 129002 |||||| | | || | |||||||||||||| ||||| Sbjct 453914 TCAATCAGAGTGCGTTGC---GAGATTTCCCACACCGTCTTGTA 453954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419700693807970