Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3208 104 2e-17 seq236 104 2e-17 seq3256 98.7 7e-16 >seq3208 Length=262556 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || || || ||||| || || || ||||| |||| || || Sbjct 84063 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAGACTATCACTCTGGAAGTGGAATCCTCA 84004 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | | | |||||||| ||| |||||||| || | ||| |||| Sbjct 84003 GACTCTATCGACAACGTCAAGCAAAAGATTCAAGATAAAGAAGGCATCCCTCCTGACCAG 83944 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || |||||||| |||||||||||||||||| ||| | | |||||||| Sbjct 83943 CAACGGCTCATCTTTGCAGGCAAACAACTAGAAGATGGTCGCACTCTCTCTGATTACAAC 83884 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || |||||||| || || || |||| | ||||||||||| || Sbjct 83883 ATCCAAAAGGAATCAACCCTACACTTGGTGCTCCGTTTACGAGGTGG 83837 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| | || ||||| |||||||| ||||| |||| | | Sbjct 84291 ATGCAAATCTTTGTAAAAACTCTTACTGGCAAGACCATTACATTGGAAGTGGAATCTTCT 84232 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | | | || ||||| || ||||| || || | || ||||| Sbjct 84231 GACTCCATCGACAACGTCAAACAAAAGATCCAAGATAAGGAAGGCATCCCACCCGACCAA 84172 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | ||||||||||| || ||||| || |||||| || | |||| ||||| Sbjct 84171 CAGCGCCTTATCTTTGCCGGGAAACAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 84112 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| ||||||||| |||| | ||| | || || || Sbjct 84111 ATTCAAAAGGAATCGACTCTTCATCTGGTGCTTCGTCTTCGTGGTGG 84065 >seq236 Length=318481 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || || | || ||||| || || ||| | ||| |||| || | Sbjct 112791 ATGCAAATCTTCGTCAAGACGCTTACAGGCAAGACAATCACCCTTGAAGTGGAATCCTCT 112732 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | || | |||||||| ||| || || || ||| | ||| | ||||| Sbjct 112731 GACTCCATCGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 112672 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || |||||||| ||||||||||| |||||| || | | |||||||| Sbjct 112671 CAACGTCTCATCTTTGCCGGCAAACAACTGGAAGATGGCCGCACCCTCTCTGATTACAAC 112612 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| ||||||||| |||| | ||| | || || || Sbjct 112611 ATTCAAAAGGAATCCACTCTTCATTTGGTTCTCCGTCTCCGTGGTGG 112565 >seq3256 Length=796958 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || || || ||||| ||||||||| ||||| |||| || | Sbjct 723402 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATTACCTTGGAAGTGGAATCCTCC 723461 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | | |||||||| || || || || ||| | || | ||||| Sbjct 723462 GACTCTATCGATAACGTCAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAA 723521 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | ||||| |||||||||||||| |||||| || | | || ||||| Sbjct 723522 CAACGCTTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACGCTCTCTGACTACAAC 723581 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || |||||||||||||||||| |||| | ||| | || || || Sbjct 723582 ATCCAAAAGGAATCTACTCTTCATTTGGTTCTCCGTCTCCGTGGTGG 723628 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || | || || || || ||||| ||||| || | ||| ||| | Sbjct 723170 CAACATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTTGAATC 723229 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || | | | | | | |||||||| ||| ||||| || || | || | | Sbjct 723230 TTCCGACTCCATCGACAACGTCAAGCAAAAGATTCAAGATAAGGAAGGAATCCCCCCAGA 723289 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||| || |||| ||||| || ||||| ||| | |||||| ||| | | || || Sbjct 723290 CCAGCAACGACTCATCTTCGCCGGCAAGCAATTGGAAGATGGCCGCACTCTTTCTGACTA 723349 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||| |||||||||||||||||| |||| | ||| | || || || Sbjct 723350 CAACATTCAAAAGGAATCTACTCTTCATCTGGTCCTCCGTCTCCGTGGTGG 723400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358101501519652