Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq236 143 2e-29 seq3208 131 1e-25 seq3256 122 7e-23 seq2275 89.7 4e-13 >seq236 Length=318481 Score = 143 bits (158), Expect = 2e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| ||||| | || ||||| ||||||||||||||||| Sbjct 112562 ATACCACCACGGAGACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCA 112621 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| |||||||| || || |||||||||| |||||||| ||| Sbjct 112622 GAGAGGGTGCGGCCATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGGTCTGGA 112681 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||||||| || | | || | || ||| | |||||| Sbjct 112682 GGAATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTGTCGATGGAGTCAGAGGATTCC 112741 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 || || | ||| | || ||||| || || || || || || || ||||||| Sbjct 112742 ACTTCAAGGGTGATTGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCATGG 112793 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || || || | || ||||||||||| |||||||| || Sbjct 111752 ACCACCACGGAGACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGA 111811 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || |||||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 111812 GAGCGTGCGGCCATCTTCCAGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGAGG 111871 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||||||||| || ||||||||| || | | || | | ||| | |||||| || Sbjct 111872 GATGCCTTCTTTATCTTGAATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCCAC 111931 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || ||||| ||||| || || ||||| || ||||| Sbjct 111932 TTCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || ||||||||||| |||||||| || Sbjct 111978 ATACCACCACGGAGACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCC 112037 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| |||||||||||||| |||| ||||| ||||| || ||| Sbjct 112038 GAGAGCGTGCGGCCATCTTCCAGTTGTTTACCAGCAAAGATAAGACGTTGTTGATCAGGA 112097 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||||||||| || |||||||| || | | || | | ||| | |||||| Sbjct 112098 GGGATGCCTTCTTTATCTTGGATCTTTTGCTTGACGTTGTCGATAGAGTCAGAGGATTCC 112157 Query 114333 ACGTCCACGGT 114343 || || | ||| Sbjct 112158 ACTTCAAGGGT 112168 >seq3208 Length=262556 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | || ||||| |||||||||||||| ||| Sbjct 84062 ATACCACCACGAAGACGAAGCACCAGATGAAGAGTCGATTCCTTTTGAATGTTGTAGTCG 84121 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||| ||||| || || |||| || ||||||||||| || Sbjct 84122 GAGAGTGTGCGGCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGGCGCTGTTGGTCGGGT 84181 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| || || ||||||||||| | | || | || ||| | ||||| Sbjct 84182 GGGATGCCTTCCTTATCTTGGATCTTTTGTTTGACGTTGTCGATGGAGTCAGAAGATTCC 84241 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| || |||||||||||||| || ||||| Sbjct 84242 ACTTCCAATGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAGATTTGCAT 84291 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || || |||| || ||||| ||||| ||||||||||| | ||| ||| |||||| Sbjct 83855 ACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCT 83914 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 |||||||| || || ||||||| || || ||||| ||||| ||||||||||| || | Sbjct 83915 AGTTGTTTGCCTGCAAAGATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGA 83974 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 |||||||| || | | || | | ||| | |||||| || |||| || | || ||| Sbjct 83975 ATCTTTTGCTTGACGTTGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTG 84034 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| || || || |||||||| Sbjct 84035 CCAGTCAAAGTCTTGACGAAGATCTGCAT 84063 >seq3256 Length=796958 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | |||||||| ||||| |||||||| || Sbjct 723859 ATACCACCACGGAGACGGAGAACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 723800 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| ||||||||||||||| |||| | ||| || || || || Sbjct 723799 GAGAGAGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGG 723740 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| |||||||| || | | || | | ||| | |||||| Sbjct 723739 GGGATACCTTCCTTGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCAGAGGATTCC 723680 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| |||| ||| || ||||| || ||||| Sbjct 723679 ACTTCCAGAGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 723630 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | |||||||||||||| |||||||| || Sbjct 724315 ATACCACCACGGAGACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCA 724256 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||| | ||||||||||||| |||| | ||| |||||||| || Sbjct 724255 GAGAGCGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGG 724196 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| |||||||| || | | || | | ||| | |||||| Sbjct 724195 GGGATACCTTCCTTGTCTTGGATCTTTTGCTTCACATTGTCGATAGAGTCCGAGGATTCC 724136 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| || || ||||| || ||||| Sbjct 724135 ACTTCCAGAGTGATTGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || | ||| | |||||||||||||| |||||||| || Sbjct 724541 ACCACCACGGAGACGTAGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGA 724482 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||||| |||||| || || || || || |||| | ||| || ||||| || || Sbjct 724481 CAAAGTACGACCATCTTCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTGGTCTGGGGG 724422 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || ||||| ||||| |||||||| || | | || | | ||| | |||||| || Sbjct 724421 GATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTATCGATAGAGTCAGAGGATTCCAC 724362 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || ||||| ||||| || || ||||| || ||||| Sbjct 724361 TTCCAAAGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | |||||||| |||||||||||||| || Sbjct 723403 ATACCACCACGGAGACGGAGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCA 723344 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| | ||| || || ||| ||||||| || || ||||| || Sbjct 723343 GAAAGAGTGCGGCCATCTTCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGG 723284 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || ||||||||| || | | || | || ||||| ||||| Sbjct 723283 GGGATTCCTTCCTTATCTTGAATCTTTTGCTTGACGTTGTCGATGGAGTCGGAAGATTCA 723224 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | || ||||| |||| || || || || || |||||| Sbjct 723223 ACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATG 723173 >seq2275 Length=1761326 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || ||||| |||||||||||||| || Sbjct 759202 ATACCACCACGGAGACGGAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCA 759261 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| ||||| ||||| || ||||| |||| ||||| || || || ||| Sbjct 759262 GACAAAGTACGGCCGTCTTCGAGTTGCTTGCCAGCAAAGATAAGACGTTGCTGATCAGGA 759321 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || || ||||| ||||| |||||||| || Sbjct 759322 GGGATACCTTCCTTGTCTTGGATCTTTTGCTT 759353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420107067368856