Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20glauca_20[genbank_20GCA_5F900079185.1_202016-04-15] 5,338 sequences; 48,746,359 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq236 158 3e-33 seq3256 154 3e-32 seq3208 143 6e-29 seq209 143 6e-29 seq2275 136 9e-27 seq319 136 9e-27 seq3466 111 4e-19 >seq236 Length=318481 Score = 158 bits (174), Expect = 3e-33 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || | || | ||| |||||||||||| || ||||| Sbjct 111750 TGACCACCACGGAGACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCA 111809 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||||||||| || ||||| | |||||| || || ||||| ||||| |||||| | Sbjct 111810 GAGAGCGTGCGGCCATCTTCCAGTTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGA 111869 Query 288364 GGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| ||||||||||| || || ||| || || ||||| || ||||| || ||||| Sbjct 111870 GGGATGCCTTCTTTATCTTGAATCTTTTGC-TTGACGTTGTCGATAGAGTCAGAGGATTC 111928 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || ||||| |||||||| || || ||||| Sbjct 111929 CACTTCAAGGGTGATTGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 111979 Score = 134 bits (148), Expect = 3e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | ||| |||||||||||| || ||||| | | Sbjct 111981 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCCGAG 112040 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || ||||| | |||||| || || ||||| ||||| |||||| | ||| Sbjct 112041 AGCGTGCGGCCATCTTCCAGTTGTTTACCAGCAAAGATAAGACGTTGTTGATCAGGAGGG 112100 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||||||||| ||||| ||| || || ||||| || ||||| || ||||| || Sbjct 112101 ATGCCTTCTTTATCTTGGATCTTTTGC-TTGACGTTGTCGATAGAGTCAGAGGATTCCAC 112159 Query 288426 TTCGAGCGTGATCGTCTT 288443 ||| || ||||| ||||| Sbjct 112160 TTCAAGGGTGATGGTCTT 112177 Score = 118 bits (130), Expect = 3e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | ||||| ||| ||| ||||| || || || || | | Sbjct 112565 CCACCACGGAGACGGAGAACCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAG 112624 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | |||||| || || ||||| ||||| ||||| ||||| Sbjct 112625 AGGGTGCGGCCATCTTCCAGTTGTTTGCCGGCAAAGATGAGACGTTGTTGG---TCTGGA 112681 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || ||||| || || || || ||| |||| || || || || || || ||||| Sbjct 112682 GGAATACCTTCCTTGTCTTGAATCTTTTGCTTG-ACATTGTCGATGGAGTCAGAGGATTC 112740 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || || || ||||||||||| || ||||| Sbjct 112741 CACTTCAAGGGTGATTGTCTTGCCTGTAAGCGTCTTGACGAAGATTTGCAT 112791 >seq3256 Length=796958 Score = 154 bits (170), Expect = 3e-32 Identities = 175/231 (76%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| || ||| |||||||| || ||||| | | Sbjct 724084 CCACCACGGAGACGGAGAACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAG 724025 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || ||||| | |||||| || |||||||||| || ||||| |||||| Sbjct 724024 AGCGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAAGCGTTGTTGG---TCTGGG 723968 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||||| || || ||||| ||| |||| |||||| || ||||| || ||||| Sbjct 723967 GGGATTCCTTCCTTGTCTTGGATCTTTTGCTT-CACGTTGTCGATAGAGTCAGAGGATTC 723909 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| || || || ||||| ||||||||||| || ||||| Sbjct 723908 CACTTCAAGGGTGATTGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCAT 723858 Score = 140 bits (154), Expect = 8e-28 Identities = 172/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||||| || ||| ||||| || || ||||| | Sbjct 723400 CCACCACGGAGACGGAGGACCAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAA 723341 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| ||||| || || |||||||| || || || || |||||| Sbjct 723340 AGAGTGCGGCCATCTTCCAATTGCTTGCCGGCGAAGATGAGTCGTTGCTGG---TCTGGG 723284 Query 288367 ---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||||| ||||| || || ||| |||| ||||| || || || ||| ||||| Sbjct 723283 GGGATTCCTTCCTTATCTTGAATCTTTTGCTTG-ACGTTGTCGATGGAGTCGGAAGATTC 723225 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| || |||| ||||||||||| || ||||| Sbjct 723224 AACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 723174 Score = 140 bits (154), Expect = 8e-28 Identities = 172/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| || |||||||||||| || ||||| | | Sbjct 724312 CCACCACGGAGACGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAG 724253 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 ||||| || || ||||| |||||||| || |||||||||| ||| ||||| ||| Sbjct 724252 AGCGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTG---GTCTGGG 724196 Query 288364 GGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| ||||| || || ||||| ||| || ||||| || || ||||| || ||||| Sbjct 724195 GGGATACCTTCCTTGTCTTGGATCTTTTGC-TTCACATTGTCGATAGAGTCCGAGGATTC 724137 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || |||| ||||| || || || ||||| Sbjct 724136 CACTTCCAGAGTGATTGTCTTACCAGTCAAGGTCTTCACAAAGATTTGCAT 724086 Score = 109 bits (120), Expect = 1e-18 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | || |||||||||||| || ||||| | Sbjct 724540 CCACCACGGAGACGTAGGACCAGATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 724481 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | || || || ||||| | || || || || ||||||| ||| || || ||| Sbjct 724480 AAAGTACGACCATCTTCGAGCTGCTTCCCGGCAAAGATCAAACGTTGCTG---GTCTGGG 724424 Query 288364 GGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| ||||| || || ||||| ||| || || ||||| || ||||| || ||||| Sbjct 724423 GGGATACCTTCCTTGTCTTGGATCTTTTGC-TTGACGTTATCGATAGAGTCAGAGGATTC 724365 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || ||||| || ||||| |||||||| || || ||||| Sbjct 724364 CACTTCCAAAGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 724314 >seq3208 Length=262556 Score = 143 bits (158), Expect = 6e-29 Identities = 149/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || || || | ||| ||||| || ||||||| |||||| ||||| || Sbjct 83872 TTCCTTTTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCTAGTTGTTTGCCTGCAAA 83931 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGT 288400 ||| || || || || | ||||| ||||||||||| || || ||| || || |||| Sbjct 83932 GATGAGCCGTTGCTGGTCAGGAGGGATGCCTTCTTTATCTTGAATCTTTTGC-TTGACGT 83990 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || ||||| || ||||| ||||| || ||||| ||||| || |||| |||||||| Sbjct 83991 TGTCGATAGAGTCTGAGGATTCCACTTCCAGAGTGATAGTCTTGCCAGTCAAAGTCTTGA 84050 Query 288461 CGAATATCTGCAT 288473 |||| |||||||| Sbjct 84051 CGAAGATCTGCAT 84063 >seq209 Length=213014 Score = 143 bits (158), Expect = 6e-29 Identities = 310/457 (68%), Gaps = 10/457 (2%) Strand=Plus/Minus Query 72348 GTAGATGCTCTCGGTGTTTTGCGTTTACTAGACGCCGTTCGTATATCGGGTGT--CAACT 72405 || |||||||||||| |||||||||||| || ||| | || | | ||| | || | Sbjct 62935 GTCGATGCTCTCGGTACTTTGCGTTTACTGGATGCCATCCGAACCTGTGGTTTGACAGAT 62876 Query 72406 CT----CGAATTTGCCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCT 72461 | || | | |||||| || | || || || ||||| ||||| |||| ||| Sbjct 62875 CGTGTGCGTTTCTACCAAGCCTCCACTTCTGAATTATATGGTAAAGTAGTGGAAACCCCT 62816 Query 72462 CAGACGGAAAATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCT 72521 || | ||||| || || || || ||||| ||||| ||||| || ||| | || | | Sbjct 62815 CAAAAGGAAACCACCCCCTTCTACCCTCGCTCTCCTTATGGTGTGGCCAAGCTCTATGGT 62756 Query 72522 TATTGGATCTGTAAA-AATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTG 72580 || ||||| ||| || |||||||| || || |||||||| | || ||| || Sbjct 62755 TACTGGAT-TGTCGTCAACTACCGTGAATCATACAACATGTACGCCTGTAACGGTATCCT 62697 Query 72581 TTTCAATCACGAGAGTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGT 72640 ||||| ||||| || | | |||| | || ||||| ||||| ||| | |||| Sbjct 62696 CTTCAACCACGAATCCCCTCGCCGTGGCCGTACCTTTGTGACCCGTAAGATCTCCAAGGC 62637 Query 72641 GGTCGCGAATATTTTCAATGGT-GTCGAAAAATGCATGTATCTCGGTAATATAGATGCCA 72699 || || |||| |||| ||| || | || | || |||||||| || ||||| | Sbjct 62636 TGTGGCTGATATCCATCTTGGTCGTC-AAGACTGTCTCTACCTCGGTAACATCGATGCTA 62578 Query 72700 AAAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAG 72759 | | |||||||| |||| ||| ||||| |||| |||||| ||||| ||||||||| Sbjct 62577 AGCGTGATTGGGGTCATGCTCGGGACTACGTTGAAGGCATGTGGCTGATGTTGCAACAAG 62518 Query 72760 ATACTCCGGATGACTATGTGATTGCAACAGGGAAAAC 72796 || || || |||| |||| | || || || |||| Sbjct 62517 ATCAACCTGAAGACTTTGTGTTGGCCACTGGTGAAAC 62481 >seq2275 Length=1761326 Score = 136 bits (150), Expect = 9e-27 Identities = 174/238 (73%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||||||||| || | || ||| ||||| ||||||||||| || ||||| |||| Sbjct 1159499 ATCGGTATGAACTCCAAGCTTATGTGCCAATACATCGAATTCGTCGCCGATCG--CCTTC 1159442 Query 269212 ACG--GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269 | || || ||| | ||||| ||||| || | || ||||||| ||||||||| | Sbjct 1159441 TGGTCGCTCTGGGTCAAGAGAAGCACTACAAATCCACCAACCCCTTCGACTTTATGGATC 1159382 Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTC 269329 | || || ||| |||| || || ||||| || ||||| |||||| ||| ||||||||| Sbjct 1159381 TGATCTCTCTCCAAGGCAAAACCAACTTTTTTGAAAAACGTGTCTCCGATTATCAACGTG 1159322 Query 269330 CTGGTGTAATGAA------TCCAGAAGACAATATTTTTGCCATCGATGATGATTTTTA 269381 ||||||| ||||| ||||||||| || | || || | |||| ||| ||||| Sbjct 1159321 CTGGTGTTATGAACAAGACTCCAGAAGAAAAGAACTTCACCTTAGATGCTGACTTTTA 1159264 >seq319 Length=278629 Score = 136 bits (150), Expect = 9e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 269178 TCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTA 269237 |||||| ||||||||||| || |||||| |||| ||| |||||| | || || || Sbjct 176298 TCAATACATCGAATTCGTCGCCGATCGTCTCTTGGTGGCTCTCGGTCAAGACAAGCACTA 176239 Query 269238 CAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTT 269297 ||| || |||||||| | ||||||||| || || || || |||| ||||| ||||| Sbjct 176238 CAACTCTTCCAATCCCTTTGACTTTATGGACCTGATCTCCCTTCAAGGCAAGACAAACTT 176179 Query 269298 CTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATGAA 269342 ||||||||| |||||| ||| ||||||||| ||||||| ||||| Sbjct 176178 CTTCGAAAAACGTGTCTCCGATTATCAACGTGCTGGTGTCATGAA 176134 >seq3466 Length=2213 Score = 111 bits (122), Expect = 4e-19 Identities = 260/386 (67%), Gaps = 10/386 (3%) Strand=Plus/Plus Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475 |||||| || | || || |||| || || || |||| || || | ||||| || Sbjct 399 CCAAGCCTCCACCTCTGAACTGTACGGCAAGGTTGTGGAAACCCCGCAAAAGGAAACCAC 458 Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 || || || || || || |||||||| || ||| | |||| ||| ||||| ||| Sbjct 459 CCCCTTCTACCCCCGCTCTCCCTACGGTGTGGCCAAGCTCTACGGTTACTGGAT-TGTCG 517 Query 72536 A-AATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGA 72594 || |||||||| || || |||||||| | || ||| || ||||| ||||| Sbjct 518 TCAACTACCGTGAATCATACAACATGTACGCCTGTAACGGTATCCTCTTCAACCACGAAT 577 Query 72595 GTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTT 72654 |||| | | |||| ||| || || || || ||| | | || || |||| Sbjct 578 CTCCCCGCCGTGGCCGCACGTTTGTCACCCGCAAGATCTCCCGTGCCGTGGCCGATAT-- 635 Query 72655 TCAAT---GGT-GTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGG 72710 | || ||| ||| || |||| ||||||||||||| || |||||||| | |||||| Sbjct 636 -CCATCTCGGTCGTC-AAGAATGTCTGTATCTCGGTAACATTGATGCCAAGCGTGATTGG 693 Query 72711 GGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGAT 72770 || ||||| || || || |||| ||||||||||||||||| ||||| || || Sbjct 694 GGCCATGCGCGTGACTATGTCGAAGGCATGTGGTTGATGCTGCAGCAAGACGAACCCGAA 753 Query 72771 GACTATGTGATTGCAACAGGGAAAAC 72796 |||| ||| | || || || |||| Sbjct 754 GACTTTGTCCTGGCCACTGGCGAAAC 779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179573719749164